RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Chst12Q99LL3 419 aa7.71□□□□□ -1.17
Clk1-201ENSMUST00000034868 Rtl1Q7M732 1744 aa7.71□□□□□ -1.18
Clk1-201ENSMUST00000034868 Znf316Q6PGE4 1016 aa7.71□□□□□ -1.18
Clk1-201ENSMUST00000034868 Gigyf2Q6Y7W8 1291 aaKnown RBP7.71□□□□□ -1.18
Clk1-201ENSMUST00000034868 Zranb1Q7M760 708 aa7.71□□□□□ -1.18
Clk1-201ENSMUST00000034868 Gm45233A0A0N4SVE0 221 aa7.7□□□□□ -1.18
Clk1-201ENSMUST00000034868 Mfap1aC0HKD8 439 aaKnown RBP7.7□□□□□ -1.18
Clk1-201ENSMUST00000034868 Mfap1bC0HKD9 439 aaKnown RBP7.7□□□□□ -1.18
Clk1-201ENSMUST00000034868 Trbv21A0A0A6YX06 97 aa7.69□□□□□ -1.18
Clk1-201ENSMUST00000034868 Atf4Q06507 349 aa7.69□□□□□ -1.18
Clk1-201ENSMUST00000034868 NrdcQ8BHG1 1161 aa7.69□□□□□ -1.18
Clk1-201ENSMUST00000034868 Mnx1Q9QZW9 404 aa7.69□□□□□ -1.18
Clk1-201ENSMUST00000034868 Prrt3Q6PE13 971 aa7.69□□□□□ -1.18
Clk1-201ENSMUST00000034868 Lrfn2Q80TG9 788 aa7.69□□□□□ -1.18
Clk1-201ENSMUST00000034868 Inpp5dQ9ES52 1191 aa7.69□□□□□ -1.18
Clk1-201ENSMUST00000034868 Dsg2O55111 1122 aa7.68□□□□□ -1.18
Clk1-201ENSMUST00000034868 Dnajc14Q921R4 703 aa7.68□□□□□ -1.18
Clk1-201ENSMUST00000034868 Acin1Q9JIX8 1338 aaKnown RBP7.67□□□□□ -1.18
Clk1-201ENSMUST00000034868 Dab2P98078 766 aa7.67□□□□□ -1.18
Clk1-201ENSMUST00000034868 NischQ80TM9 1593 aa7.67□□□□□ -1.18
Clk1-201ENSMUST00000034868 Znf710Q3U288 666 aa7.66□□□□□ -1.18
Clk1-201ENSMUST00000034868 TMEM121BQ99MX7 572 aa7.66□□□□□ -1.18
Clk1-201ENSMUST00000034868 Rpusd2Q149F1 553 aa7.66□□□□□ -1.18
Clk1-201ENSMUST00000034868 Foxd4Q60688 444 aa7.66□□□□□ -1.18
Clk1-201ENSMUST00000034868 Tbc1d12Q6A039 696 aa7.66□□□□□ -1.18
Clk1-201ENSMUST00000034868 Ccdc34Q3UI66 367 aa7.65□□□□□ -1.18
Clk1-201ENSMUST00000034868 Gm35339A0A140LHH9 1649 aa7.65□□□□□ -1.19
Clk1-201ENSMUST00000034868 Fgd1P52734 960 aa7.64□□□□□ -1.19
Clk1-201ENSMUST00000034868 Adam19O35674 920 aa7.64□□□□□ -1.19
Clk1-201ENSMUST00000034868 Tfip11Q9ERA6 838 aaKnown RBP7.64□□□□□ -1.19
Clk1-201ENSMUST00000034868 Ccdc85aQ5SP85 500 aa7.63□□□□□ -1.19
Clk1-201ENSMUST00000034868 Slc5a4bQ91ZP4 660 aa7.63□□□□□ -1.19
Clk1-201ENSMUST00000034868 JmyQ9QXM1 983 aa7.63□□□□□ -1.19
Clk1-201ENSMUST00000034868 Pak3Q61036 559 aa7.62□□□□□ -1.19
Clk1-201ENSMUST00000034868 Scnn1bQ9WU38 638 aa7.62□□□□□ -1.19
Clk1-201ENSMUST00000034868 GcgrQ61606 485 aa7.61□□□□□ -1.19
Clk1-201ENSMUST00000034868 Igsf3Q6ZQA6 1194 aa7.61□□□□□ -1.19
Clk1-201ENSMUST00000034868 SowahdQ8BY98 327 aa7.61□□□□□ -1.19
Clk1-201ENSMUST00000034868 Ube2q2Q8K2Z8 378 aa7.61□□□□□ -1.19
Clk1-201ENSMUST00000034868 Cep57l1Q8VDS7 400 aa7.61□□□□□ -1.19
Clk1-201ENSMUST00000034868 Mfsd10Q9D2V8 456 aaKnown RBP7.61□□□□□ -1.19
Clk1-201ENSMUST00000034868 Apba1B2RUJ5 842 aa7.6□□□□□ -1.19
Clk1-201ENSMUST00000034868 Psen1P49769 467 aa7.6□□□□□ -1.19
Clk1-201ENSMUST00000034868 Gtf3c6Q9D8P7 227 aa7.6□□□□□ -1.19
Clk1-201ENSMUST00000034868 Speer3W4VSP1 261 aa7.6□□□□□ -1.19
Clk1-201ENSMUST00000034868 Masp1P98064 704 aa7.59□□□□□ -1.19
Clk1-201ENSMUST00000034868 March10E9PX79 788 aa7.59□□□□□ -1.2
Clk1-201ENSMUST00000034868 OatP29758 439 aa7.59□□□□□ -1.2
Clk1-201ENSMUST00000034868 Fbxo31Q3TQF0 507 aa7.59□□□□□ -1.2
Clk1-201ENSMUST00000034868 Map3k7Q62073 579 aa7.59□□□□□ -1.2
Clk1-201ENSMUST00000034868 Ano8Q6PB70 1060 aa7.59□□□□□ -1.2
Clk1-201ENSMUST00000034868 Unc5aQ8K1S4 898 aa7.59□□□□□ -1.2
Clk1-201ENSMUST00000034868 Rbm25B2RY56 838 aaKnown RBP7.58□□□□□ -1.2
Clk1-201ENSMUST00000034868 Hdac6Q9Z2V5 1149 aa7.58□□□□□ -1.2
Clk1-201ENSMUST00000034868 Zfp777B9EKF4 885 aa7.57□□□□□ -1.2
Clk1-201ENSMUST00000034868 Znf326O88291 580 aa7.57□□□□□ -1.2
Clk1-201ENSMUST00000034868 Myo1bP46735 1107 aa7.57□□□□□ -1.2
Clk1-201ENSMUST00000034868 Wwc1Q5SXA9 1104 aa7.57□□□□□ -1.2
Clk1-201ENSMUST00000034868 BcanQ61361 883 aa7.57□□□□□ -1.2
Clk1-201ENSMUST00000034868 Ccdc180J3QNE4 1664 aa7.57□□□□□ -1.2
Clk1-201ENSMUST00000034868 C1qbpO35658 278 aa7.56□□□□□ -1.2
Clk1-201ENSMUST00000034868 SnrkQ8VDU5 748 aa7.56□□□□□ -1.2
Clk1-201ENSMUST00000034868 Cfap70D3YVL2 1141 aa7.56□□□□□ -1.2
Clk1-201ENSMUST00000034868 Psme1P97371 249 aa7.55□□□□□ -1.2
Clk1-201ENSMUST00000034868 Gm38655A0A286YDK6 273 aa7.54□□□□□ -1.2
Clk1-201ENSMUST00000034868 LtbrP50284 415 aa7.54□□□□□ -1.2
Clk1-201ENSMUST00000034868 Nob1Q8BW10 403 aa7.54□□□□□ -1.2
Clk1-201ENSMUST00000034868 Mkrn1Q9QXP6 481 aa7.54□□□□□ -1.2
Clk1-201ENSMUST00000034868 Lemd3Q9WU40 921 aa7.54□□□□□ -1.2
Clk1-201ENSMUST00000034868 Spaca7Q9D2S4 182 aa7.54□□□□□ -1.2
Clk1-201ENSMUST00000034868 Kcna1P16388 495 aa7.52□□□□□ -1.21
Clk1-201ENSMUST00000034868 Cers3Q1A3B0 383 aa7.52□□□□□ -1.21
Clk1-201ENSMUST00000034868 Dmrta2A2A9A2 531 aa7.51□□□□□ -1.21
Clk1-201ENSMUST00000034868 Plekhg3Q4VAC9 1341 aa7.51□□□□□ -1.21
Clk1-201ENSMUST00000034868 Pola2P33611 600 aa7.51□□□□□ -1.21
Clk1-201ENSMUST00000034868 Trim26Q99PN3 545 aa7.51□□□□□ -1.21
Clk1-201ENSMUST00000034868 Brd1E9PZ26 1189 aaKnown RBP7.5□□□□□ -1.21
Clk1-201ENSMUST00000034868 Abl2Q4JIM5 1182 aa7.5□□□□□ -1.21
Clk1-201ENSMUST00000034868 Retreg3Q9CQV4 466 aa7.5□□□□□ -1.21
Clk1-201ENSMUST00000034868 LrgukQ9D5S7 820 aa7.5□□□□□ -1.21
Clk1-201ENSMUST00000034868 Kdm2bQ6P1G2 1309 aa7.49□□□□□ -1.21
Clk1-201ENSMUST00000034868 Hmx1O70218 332 aa7.49□□□□□ -1.21
Clk1-201ENSMUST00000034868 St18Q80TY4 1045 aa7.49□□□□□ -1.21
Clk1-201ENSMUST00000034868 Creld1Q91XD7 420 aa7.49□□□□□ -1.21
Clk1-201ENSMUST00000034868 Q8C6G1 249 aa7.48□□□□□ -1.21
Clk1-201ENSMUST00000034868 Anks4bQ8K3X6 423 aa7.48□□□□□ -1.21
Clk1-201ENSMUST00000034868 Sirt1Q923E4 737 aa7.48□□□□□ -1.21
Clk1-201ENSMUST00000034868 Tbc1d2bQ3U0J8 965 aa7.46□□□□□ -1.21
Clk1-201ENSMUST00000034868 Ivns1abpQ920Q8 642 aa7.46□□□□□ -1.21
Clk1-201ENSMUST00000034868 Mrgprb8Q7TN51 330 aa7.46□□□□□ -1.22
Clk1-201ENSMUST00000034868 Armc3A2AU72 881 aa7.44□□□□□ -1.22
Clk1-201ENSMUST00000034868 ZxdbA2CE44 873 aa7.44□□□□□ -1.22
Clk1-201ENSMUST00000034868 ErfeQ6PGN1 340 aa7.43□□□□□ -1.22
Clk1-201ENSMUST00000034868 Mical1Q8VDP3 1048 aa7.43□□□□□ -1.22
Clk1-201ENSMUST00000034868 Neurod1Q60867 357 aa7.43□□□□□ -1.22
Clk1-201ENSMUST00000034868 Scaf8Q6DID3 1268 aa7.43□□□□□ -1.22
Clk1-201ENSMUST00000034868 Snd1Q78PY7 910 aaKnown RBP7.43□□□□□ -1.22
Clk1-201ENSMUST00000034868 ClmQ7TSN2 230 aa7.43□□□□□ -1.22
Clk1-201ENSMUST00000034868 Cluap1Q8R3P7 413 aa7.43□□□□□ -1.22
Clk1-201ENSMUST00000034868 Gpatch8A2A6A1 1505 aa7.42□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms