RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Mphosph9A6H5Y1 991 aa18.54■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Rock2P70336 1388 aa18.53■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Znf608Q56A10 1511 aa18.53■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Arid4bA2CG63 1314 aaKnown RBP18.53■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Robo2Q7TPD3 1470 aa18.53■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Naip6Q9JIB6 1403 aa18.52■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Scaf1Q5U4C3 1256 aaKnown RBP18.52■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Fam50aQ9WV03 339 aaKnown RBP18.51■□□□□ 0.55
Prpf38b-201ENSMUST00000029480 Tubgcp6G5E8P0 1769 aa18.5■□□□□ 0.55
Prpf38b-201ENSMUST00000029480 Hnrnpul2Q00PI9 745 aaKnown RBP18.49■□□□□ 0.55
Prpf38b-201ENSMUST00000029480 Plekhg5Q66T02 1073 aa18.49■□□□□ 0.55
Prpf38b-201ENSMUST00000029480 Adgrb2Q8CGM1 1561 aa18.48■□□□□ 0.55
Prpf38b-201ENSMUST00000029480 RalgapbQ8BQZ4 1484 aa18.48■□□□□ 0.55
Prpf38b-201ENSMUST00000029480 Zfyve16Q80U44 1528 aa18.48■□□□□ 0.55
Prpf38b-201ENSMUST00000029480 Cfap65Q3V0B4 1847 aa18.47■□□□□ 0.55
Prpf38b-201ENSMUST00000029480 Ak9G3UYQ4 1894 aa18.46■□□□□ 0.55
Prpf38b-201ENSMUST00000029480 Arhgap5P97393 1501 aa18.46■□□□□ 0.55
Prpf38b-201ENSMUST00000029480 Usp47Q8BY87 1376 aa18.46■□□□□ 0.55
Prpf38b-201ENSMUST00000029480 Dot1lQ6XZL8 1540 aa18.45■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Znf316Q6PGE4 1016 aa18.45■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Cwc22Q8C5N3 908 aaKnown RBP18.45■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Eif5bQ05D44 1216 aaKnown RBP18.45■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Gtf3c3Q3TMP1 882 aa18.45■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Rtl5Q5DTT4 599 aa18.45■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Hspa5P20029 655 aaKnown RBP18.44■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Asxl1P59598 1514 aa18.44■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 SafbD3YXK2 937 aaKnown RBP18.44■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Plcd4Q8K3R3 807 aa18.44■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Clasp1Q80TV8 1535 aaKnown RBP18.43■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 AnkarA2RT91 1465 aa18.42■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Tdrd9Q14BI7 1383 aa18.42■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Zfp777B9EKF4 885 aa18.41■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Polr3aB2RXC6 1390 aa18.4■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Abca9Q8K449 1623 aa18.4■□□□□ 0.54
Prpf38b-201ENSMUST00000029480 Gm13695A2AK44 830 aa18.39■□□□□ 0.53
Prpf38b-201ENSMUST00000029480 Znf710Q3U288 666 aa18.38■□□□□ 0.53
Prpf38b-201ENSMUST00000029480 Mug2P28666 1451 aa18.38■□□□□ 0.53
Prpf38b-201ENSMUST00000029480 Kidins220E9Q9B7 1793 aa18.37■□□□□ 0.53
Prpf38b-201ENSMUST00000029480 AglF8VPN4 1532 aa18.36■□□□□ 0.53
Prpf38b-201ENSMUST00000029480 Cdk13Q69ZA1 1511 aaKnown RBP18.35■□□□□ 0.53
Prpf38b-201ENSMUST00000029480 Myom3A2ABU4 1439 aa18.35■□□□□ 0.53
Prpf38b-201ENSMUST00000029480 Trappc8E9PWG2 1437 aa18.34■□□□□ 0.53
Prpf38b-201ENSMUST00000029480 Cabp1Q9JLK7 227 aa18.34■□□□□ 0.53
Prpf38b-201ENSMUST00000029480 Ttc37F8VPK0 1563 aa18.33■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Pkd2O35245 966 aa18.33■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Clstn2Q9ER65 966 aa18.33■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Cdc42bpbQ7TT50 1713 aa18.32■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Uggt2E9Q4X2 1504 aa18.31■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Plch2A2AP18 1501 aa18.3■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Kiaa0556Q8C753 1610 aa18.3■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Tmem131lQ3U3D7 1597 aa18.29■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Trpm1Q2TV84 1622 aa18.28■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Prdm16A2A935 1275 aa18.28■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 ArxO35085 564 aa18.28■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Kdm5cP41230 1554 aa18.28■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Arid3cA6PWV5 409 aa18.27■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Kif1bQ60575 1816 aaKnown RBP18.27■□□□□ 0.52
Prpf38b-201ENSMUST00000029480 Pola1P33609 1465 aa18.27■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Akap12Q9WTQ5 1684 aa18.26■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Nup155Q99P88 1391 aaKnown RBP18.26■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Cep152A2AUM9 1736 aaKnown RBP18.26■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Chic2Q9D9G3 165 aa18.25■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Myo5cE9Q1F5 1742 aa18.25■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 ShprhQ7TPQ3 1674 aa18.24■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Depdc5P61460 1591 aa18.23■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Ssh2Q5SW75 1423 aa18.23■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Dapk1Q80YE7 1442 aa18.23■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Mink1Q9JM52 1308 aa18.22■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Itsn2Q9Z0R6 1659 aa18.22■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Tarbp1E9Q368 1579 aa18.22■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Topbp1Q6ZQF0 1515 aa18.22■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Sbno1Q689Z5 1390 aa18.21■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Sart1Q9Z315 806 aaKnown RBP18.21■□□□□ 0.51
Prpf38b-201ENSMUST00000029480 Xrn1P97789 1719 aaKnown RBP18.2■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 Ipo4Q8VI75 1082 aa18.2■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 AdgbG3UZ78 1657 aa18.19■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 Ttll5Q8CHB8 1328 aa18.17■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 Dnajc5P60904 198 aa18.17■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 Atp10aO54827 1508 aa18.17■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 Washc2Q6PGL7 1334 aa18.17■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 Nsd2Q8BVE8 1365 aa18.17■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 Fndc1E9Q043 1732 aa18.17■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 OvosQ3UU35 1456 aa18.16■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 PnisrA2AJT4 805 aaKnown RBP18.15■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 Adamts13Q769J6 1426 aa18.15■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 Nos1Q9Z0J4 1429 aa18.15■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 Prdm2A2A7B5 1709 aaKnown RBP18.14■□□□□ 0.5
Prpf38b-201ENSMUST00000029480 Abca8aQ8K442 1620 aa18.14■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Sin3aQ60520 1274 aaKnown RBP18.14■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Usp54Q8BL06 1588 aaKnown RBP18.14■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Rsph4aQ8BYM7 716 aa18.13■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Lemd3Q9WU40 921 aa18.12■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 DnmbpQ6TXD4 1580 aa18.12■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Tecpr2Q3UH45 1423 aa18.12■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Irx3P81067 507 aa18.11■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Slc24a1Q91WD8 1130 aa18.11■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Ppp1r18Q8BQ30 594 aa18.1■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Ttc41Q692V3 1318 aa18.1■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Sipa1l1Q8C0T5 1782 aa18.1■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Atp7aQ64430 1491 aa18.09■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms