RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Spag9Q58A65 1321 aaKnown RBP31.1■■■□□ 2.57
Ptx3-201ENSMUST00000029421 Asxl1P59598 1514 aa31.08■■■□□ 2.57
Ptx3-201ENSMUST00000029421 Lemd3Q9WU40 921 aa31.07■■■□□ 2.56
Ptx3-201ENSMUST00000029421 Zbtb7cQ8VCZ7 619 aa31.05■■■□□ 2.56
Ptx3-201ENSMUST00000029421 DroshaQ5HZJ0 1373 aaKnown RBP31.04■■■□□ 2.56
Ptx3-201ENSMUST00000029421 Abca17E9PX95 1733 aa31.03■■■□□ 2.56
Ptx3-201ENSMUST00000029421 Kif14L0N7N1 1674 aaKnown RBP31.01■■■□□ 2.55
Ptx3-201ENSMUST00000029421 Xrn1P97789 1719 aaKnown RBP31■■■□□ 2.55
Ptx3-201ENSMUST00000029421 Nos1Q9Z0J4 1429 aa30.98■■■□□ 2.55
Ptx3-201ENSMUST00000029421 Usp54Q8BL06 1588 aaKnown RBP30.97■■■□□ 2.55
Ptx3-201ENSMUST00000029421 Col17a1Q07563 1470 aa30.96■■■□□ 2.55
Ptx3-201ENSMUST00000029421 Cd109Q8R422 1442 aa30.96■■■□□ 2.55
Ptx3-201ENSMUST00000029421 Pde4cQ3UEI1 686 aa30.95■■■□□ 2.55
Ptx3-201ENSMUST00000029421 Robo2Q7TPD3 1470 aa30.94■■■□□ 2.54
Ptx3-201ENSMUST00000029421 OvosQ3UU35 1456 aa30.93■■■□□ 2.54
Ptx3-201ENSMUST00000029421 ShprhQ7TPQ3 1674 aa30.93■■■□□ 2.54
Ptx3-201ENSMUST00000029421 Kif1bQ60575 1816 aaKnown RBP30.9■■■□□ 2.54
Ptx3-201ENSMUST00000029421 Clasp1Q80TV8 1535 aaKnown RBP30.9■■■□□ 2.54
Ptx3-201ENSMUST00000029421 Dot1lQ6XZL8 1540 aa30.89■■■□□ 2.54
Ptx3-201ENSMUST00000029421 Atp7aQ64430 1491 aa30.88■■■□□ 2.53
Ptx3-201ENSMUST00000029421 AglF8VPN4 1532 aa30.88■■■□□ 2.53
Ptx3-201ENSMUST00000029421 Kdm5cP41230 1554 aa30.88■■■□□ 2.53
Ptx3-201ENSMUST00000029421 Hnrnpul2Q00PI9 745 aaKnown RBP30.88■■■□□ 2.53
Ptx3-201ENSMUST00000029421 Rgl3Q3UYI5 709 aa30.87■■■□□ 2.53
Ptx3-201ENSMUST00000029421 Znf518aB2RRF6 1478 aaKnown RBP30.86■■■□□ 2.53
Ptx3-201ENSMUST00000029421 Depdc5P61460 1591 aa30.85■■■□□ 2.53
Ptx3-201ENSMUST00000029421 Znf710Q3U288 666 aa30.85■■■□□ 2.53
Ptx3-201ENSMUST00000029421 Atp10aO54827 1508 aa30.82■■■□□ 2.52
Ptx3-201ENSMUST00000029421 Mbd5B1AYB6 1498 aa30.82■■■□□ 2.52
Ptx3-201ENSMUST00000029421 Rock1P70335 1354 aa30.81■■■□□ 2.52
Ptx3-201ENSMUST00000029421 Kif3bQ61771 747 aa30.81■■■□□ 2.52
Ptx3-201ENSMUST00000029421 Myom3A2ABU4 1439 aa30.81■■■□□ 2.52
Ptx3-201ENSMUST00000029421 Myo5cE9Q1F5 1742 aa30.79■■■□□ 2.52
Ptx3-201ENSMUST00000029421 Nsd2Q8BVE8 1365 aa30.78■■■□□ 2.52
Ptx3-201ENSMUST00000029421 Kiaa0556Q8C753 1610 aa30.77■■■□□ 2.52
Ptx3-201ENSMUST00000029421 Sin3aQ60520 1274 aaKnown RBP30.76■■■□□ 2.52
Ptx3-201ENSMUST00000029421 Tarbp1E9Q368 1579 aa30.75■■■□□ 2.51
Ptx3-201ENSMUST00000029421 Ptch1Q61115 1434 aa30.74■■■□□ 2.51
Ptx3-201ENSMUST00000029421 Ppip5k1A2ARP1 1436 aa30.74■■■□□ 2.51
Ptx3-201ENSMUST00000029421 Ppp1r18Q8BQ30 594 aa30.74■■■□□ 2.51
Ptx3-201ENSMUST00000029421 Ttc37F8VPK0 1563 aa30.73■■■□□ 2.51
Ptx3-201ENSMUST00000029421 Smg6P61406 1418 aaKnown RBP30.71■■■□□ 2.51
Ptx3-201ENSMUST00000029421 Topbp1Q6ZQF0 1515 aa30.71■■■□□ 2.51
Ptx3-201ENSMUST00000029421 Mug2P28666 1451 aa30.7■■■□□ 2.51
Ptx3-201ENSMUST00000029421 Fndc1E9Q043 1732 aa30.7■■■□□ 2.5
Ptx3-201ENSMUST00000029421 Plch2A2AP18 1501 aa30.69■■■□□ 2.5
Ptx3-201ENSMUST00000029421 Ylpm1Q9R0I7 1386 aaKnown RBP30.69■■■□□ 2.5
Ptx3-201ENSMUST00000029421 Washc2Q6PGL7 1334 aa30.69■■■□□ 2.5
Ptx3-201ENSMUST00000029421 Edc4Q3UJB9 1406 aaKnown RBP30.68■■■□□ 2.5
Ptx3-201ENSMUST00000029421 Dip2cE9PWR4 1557 aa30.67■■■□□ 2.5
Ptx3-201ENSMUST00000029421 RereQ80TZ9 1558 aa30.66■■■□□ 2.5
Ptx3-201ENSMUST00000029421 Dapk1Q80YE7 1442 aa30.66■■■□□ 2.5
Ptx3-201ENSMUST00000029421 Cdc42bpgQ80UW5 1551 aa30.66■■■□□ 2.5
Ptx3-201ENSMUST00000029421 Iqgap1Q9JKF1 1657 aaKnown RBP30.65■■■□□ 2.5
Ptx3-201ENSMUST00000029421 Cpsf1Q9EPU4 1441 aaKnown RBP30.65■■■□□ 2.5
Ptx3-201ENSMUST00000029421 Hdac5Q9Z2V6 1113 aa30.64■■■□□ 2.5
Ptx3-201ENSMUST00000029421 Gli2Q0VGT2 1544 aa30.63■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Mapk8ip2Q9ERE9 830 aa30.62■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Abca6Q8K441 1624 aa30.62■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Polr3aB2RXC6 1390 aa30.62■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Tmem131lQ3U3D7 1597 aa30.62■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Grwd1Q810D6 446 aaKnown RBP30.61■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Gm38655A0A286YDK6 273 aa30.61■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Naip6Q9JIB6 1403 aa30.6■■■□□ 2.49
Ptx3-201ENSMUST00000029421 AnkarA2RT91 1465 aa30.6■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Anp32aO35381 247 aa30.6■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Cdk13Q69ZA1 1511 aaKnown RBP30.59■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Ttc21bQ0HA38 1315 aa30.59■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Ttbk1Q6PCN3 1308 aa30.59■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Uggt2E9Q4X2 1504 aa30.58■■■□□ 2.49
Ptx3-201ENSMUST00000029421 Ncoa1P70365 1447 aa30.57■■■□□ 2.48
Ptx3-201ENSMUST00000029421 Rundc1Q0VDN7 615 aa30.57■■■□□ 2.48
Ptx3-201ENSMUST00000029421 AdgbG3UZ78 1657 aa30.55■■■□□ 2.48
Ptx3-201ENSMUST00000029421 Prex1Q69ZK0 1650 aa30.54■■■□□ 2.48
Ptx3-201ENSMUST00000029421 Cul9Q80TT8 1865 aa30.54■■■□□ 2.48
Ptx3-201ENSMUST00000029421 Synj2Q9D2G5 1434 aa30.53■■■□□ 2.48
Ptx3-201ENSMUST00000029421 Yeats2Q3TUF7 1407 aa30.52■■■□□ 2.48
Ptx3-201ENSMUST00000029421 Adamts13Q769J6 1426 aa30.51■■■□□ 2.48
Ptx3-201ENSMUST00000029421 RalgapbQ8BQZ4 1484 aa30.51■■■□□ 2.47
Ptx3-201ENSMUST00000029421 SafbD3YXK2 937 aaKnown RBP30.5■■■□□ 2.47
Ptx3-201ENSMUST00000029421 Erich6D3Z6S9 713 aa30.5■■■□□ 2.47
Ptx3-201ENSMUST00000029421 Card11Q8CIS0 1159 aa30.5■■■□□ 2.47
Ptx3-201ENSMUST00000029421 Hecw2Q6I6G8 1578 aa30.49■■■□□ 2.47
Ptx3-201ENSMUST00000029421 Cwc22Q8C5N3 908 aaKnown RBP30.48■■■□□ 2.47
Ptx3-201ENSMUST00000029421 Mroh3A0A1D5RM54 893 aa30.47■■■□□ 2.47
Ptx3-201ENSMUST00000029421 Iqgap3F8VQ29 1632 aa30.46■■■□□ 2.47
Ptx3-201ENSMUST00000029421 Trpm1Q2TV84 1622 aa30.45■■■□□ 2.46
Ptx3-201ENSMUST00000029421 Abcc6Q9R1S7 1498 aa30.42■■■□□ 2.46
Ptx3-201ENSMUST00000029421 Fam71e1A1L3C1 212 aa30.42■■■□□ 2.46
Ptx3-201ENSMUST00000029421 Ifit1bl1D3Z6F0 470 aa30.42■■■□□ 2.46
Ptx3-201ENSMUST00000029421 Calr4Q3TQS0 420 aa30.42■■■□□ 2.46
Ptx3-201ENSMUST00000029421 Tulp4Q9JIL5 1547 aa30.41■■■□□ 2.46
Ptx3-201ENSMUST00000029421 Sall3Q62255 1320 aa30.4■■■□□ 2.46
Ptx3-201ENSMUST00000029421 ErbinQ80TH2 1402 aa30.38■■■□□ 2.45
Ptx3-201ENSMUST00000029421 Rtl5Q5DTT4 599 aa30.38■■■□□ 2.45
Ptx3-201ENSMUST00000029421 Abca8aQ8K442 1620 aa30.35■■■□□ 2.45
Ptx3-201ENSMUST00000029421 Cfap65Q3V0B4 1847 aa30.33■■■□□ 2.45
Ptx3-201ENSMUST00000029421 Akap12Q9WTQ5 1684 aa30.33■■■□□ 2.45
Ptx3-201ENSMUST00000029421 Stk24Q99KH8 431 aa30.32■■■□□ 2.44
Ptx3-201ENSMUST00000029421 Tecpr2Q3UH45 1423 aa30.31■■■□□ 2.44
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms