RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Prdm16A2A935 1275 aa12.38□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Kcna4Q61423 654 aa12.38□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Afap1Q80YS6 731 aa12.37□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Adgrl2Q8JZZ7 1487 aa12.37□□□□□ -0.43
Ssr3-201ENSMUST00000029414 3425401B19RikD3Z1D3 1412 aa12.36□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Usp54Q8BL06 1588 aaKnown RBP12.35□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Dip2aQ8BWT5 1523 aa12.35□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Adgrb2Q8CGM1 1561 aa12.34□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Arhgap23Q69ZH9 1483 aa12.34□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Bcl9Q9D219 1425 aa12.34□□□□□ -0.43
Ssr3-201ENSMUST00000029414 ShprhQ7TPQ3 1674 aa12.33□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Rrp7aQ9D1C9 280 aaKnown RBP12.33□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Kdm3bQ6ZPY7 1562 aa12.33□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Kif1bQ60575 1816 aaKnown RBP12.33□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Med14A2ABV5 1459 aaKnown RBP12.33□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Phlpp1Q8CHE4 1687 aa12.32□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Naip5Q9R016 1403 aa12.32□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Prex1Q69ZK0 1650 aa12.32□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Il16O54824 1322 aa12.31□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Adamts7Q68SA9 1657 aa12.31□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Rsph4aQ8BYM7 716 aa12.3□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Kif3bQ61771 747 aa12.29□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Ssh2Q5SW75 1423 aa12.28□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Rimbp3Q3V0F0 1606 aa12.27□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Abcc6Q9R1S7 1498 aa12.27□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Spag9Q58A65 1321 aaKnown RBP12.27□□□□□ -0.44
Ssr3-201ENSMUST00000029414 Prdm2A2A7B5 1709 aaKnown RBP12.27□□□□□ -0.45
Ssr3-201ENSMUST00000029414 Vps8Q0P5W1 1427 aa12.26□□□□□ -0.45
Ssr3-201ENSMUST00000029414 Cabp1Q9JLK7 227 aa12.26□□□□□ -0.45
Ssr3-201ENSMUST00000029414 Ltbp4Q8K4G1 1666 aa12.26□□□□□ -0.45
Ssr3-201ENSMUST00000029414 Chd2E9PZM4 1827 aaKnown RBP12.25□□□□□ -0.45
Ssr3-201ENSMUST00000029414 Kdm5aQ3UXZ9 1690 aa12.25□□□□□ -0.45
Ssr3-201ENSMUST00000029414 Akap12Q9WTQ5 1684 aa12.24□□□□□ -0.45
Ssr3-201ENSMUST00000029414 Ncoa1P70365 1447 aa12.22□□□□□ -0.45
Ssr3-201ENSMUST00000029414 Robo2Q7TPD3 1470 aa12.21□□□□□ -0.45
Ssr3-201ENSMUST00000029414 Hfm1D3Z4R1 1434 aa12.21□□□□□ -0.45
Ssr3-201ENSMUST00000029414 Rfx7F8VPJ6 1459 aa12.21□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Tmem131lQ3U3D7 1597 aa12.21□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Chic2Q9D9G3 165 aa12.2□□□□□ -0.46
Ssr3-201ENSMUST00000029414 UacaQ8CGB3 1411 aa12.19□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Lamc1P02468 1607 aaKnown RBP12.19□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Kif13aQ9EQW7 1749 aa12.19□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Adgrb3Q80ZF8 1522 aa12.18□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Rims2Q9EQZ7 1530 aa12.18□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Gm13697A2AK42 830 aa12.17□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Fbxo41Q6NS60 873 aa12.17□□□□□ -0.46
Ssr3-201ENSMUST00000029414 DiexfQ8BTT6 772 aaKnown RBP12.16□□□□□ -0.46
Ssr3-201ENSMUST00000029414 AlkP97793 1621 aa12.16□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Scaf11E9PZM7 1456 aaKnown RBP12.16□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Gli3Q61602 1583 aa12.16□□□□□ -0.46
Ssr3-201ENSMUST00000029414 GphnQ8BUV3 769 aaKnown RBP12.15□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Asxl1P59598 1514 aa12.15□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Ino80Q6ZPV2 1559 aa12.15□□□□□ -0.46
Ssr3-201ENSMUST00000029414 Itsn1Q9Z0R4 1714 aa12.15□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Zbtb7cQ8VCZ7 619 aa12.14□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Iqgap1Q9JKF1 1657 aaKnown RBP12.14□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Pip4k2bQ80XI4 416 aa12.13□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Pde4cQ3UEI1 686 aa12.13□□□□□ -0.47
Ssr3-201ENSMUST00000029414 AnkarA2RT91 1465 aa12.12□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Tubgcp6G5E8P0 1769 aa12.12□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Fhad1A6PWD2 1420 aa12.11□□□□□ -0.47
Ssr3-201ENSMUST00000029414 NclP09405 707 aaKnown RBP12.11□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Setd1aE9PYH6 1716 aa12.11□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Hnrnpul2Q00PI9 745 aaKnown RBP12.09□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Iqgap3F8VQ29 1632 aa12.09□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Eif2ak4Q9QZ05 1648 aa12.09□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Ylpm1Q9R0I7 1386 aaKnown RBP12.09□□□□□ -0.47
Ssr3-201ENSMUST00000029414 Zc3h13E9Q784 1729 aaKnown RBP12.08□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Fam50aQ9WV03 339 aaKnown RBP12.08□□□□□ -0.48
Ssr3-201ENSMUST00000029414 DroshaQ5HZJ0 1373 aaKnown RBP12.07□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Nrxn3Q6P9K9 1571 aa12.07□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Iqsec2Q5DU25 1478 aa12.07□□□□□ -0.48
Ssr3-201ENSMUST00000029414 PzpQ61838 1495 aa12.07□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Nup155Q99P88 1391 aaKnown RBP12.07□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Gemin5Q8BX17 1502 aaKnown RBP12.07□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Skint5A7XUY5 1461 aa12.07□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Uggt1Q6P5E4 1551 aa12.06□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Clstn2Q9ER65 966 aa12.06□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Ttc21bQ0HA38 1315 aa12.06□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Tarbp1E9Q368 1579 aa12.06□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Med1Q925J9 1575 aa12.06□□□□□ -0.48
Ssr3-201ENSMUST00000029414 PplQ9R269 1755 aa12.05□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Kif21bQ9QXL1 1668 aa12.05□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Myom3A2ABU4 1439 aa12.05□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Ube2uB1AUC4 352 aa12.05□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Ehbp1l1Q99MS7 1716 aa12.04□□□□□ -0.48
Ssr3-201ENSMUST00000029414 UbtfP25976 765 aaKnown RBP12.04□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Tecpr2Q3UH45 1423 aa12.04□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Map4P27546 1125 aaKnown RBP12.04□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Nsd2Q8BVE8 1365 aa12.04□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Mia2Q91ZV0 1396 aa12.04□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Pcgf6Q99NA9 353 aa12.03□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Efcab6Q6P1E8 1516 aa12.03□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Myo3aQ8K3H5 1613 aa12.03□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Zfp644E9QA22 1323 aa12.03□□□□□ -0.48
Ssr3-201ENSMUST00000029414 Lmtk3Q5XJV6 1424 aa12.02□□□□□ -0.49
Ssr3-201ENSMUST00000029414 Thsd7aQ69ZU6 1645 aa12.02□□□□□ -0.49
Ssr3-201ENSMUST00000029414 Abca8aQ8K442 1620 aa12.02□□□□□ -0.49
Ssr3-201ENSMUST00000029414 Rapgef3Q8VCC8 918 aa12.02□□□□□ -0.49
Ssr3-201ENSMUST00000029414 PtprgQ05909 1442 aa12.01□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms