RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Polr3aB2RXC6 1390 aa27.03■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Cdk13Q69ZA1 1511 aaKnown RBP27.03■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Fam71e1A1L3C1 212 aa27.02■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 NrdcQ8BHG1 1161 aa27.02■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Rnf17Q99MV7 1640 aa27.02■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Iqgap1Q9JKF1 1657 aaKnown RBP27.02■■□□□ 1.92
Ccdc34-201ENSMUST00000028580 Ssh2Q5SW75 1423 aa27.01■■□□□ 1.91
Ccdc34-201ENSMUST00000028580 Fkbp15Q6P9Q6 1216 aaKnown RBP27■■□□□ 1.91
Ccdc34-201ENSMUST00000028580 NhsB1AV60 1647 aa27■■□□□ 1.91
Ccdc34-201ENSMUST00000028580 Clstn2Q9ER65 966 aa26.99■■□□□ 1.91
Ccdc34-201ENSMUST00000028580 Asxl1P59598 1514 aa26.98■■□□□ 1.91
Ccdc34-201ENSMUST00000028580 Cfap74Q3UY96 1578 aa26.98■■□□□ 1.91
Ccdc34-201ENSMUST00000028580 Arhgap5P97393 1501 aa26.95■■□□□ 1.9
Ccdc34-201ENSMUST00000028580 Gapvd1Q6PAR5 1458 aa26.93■■□□□ 1.9
Ccdc34-201ENSMUST00000028580 Pdcd11Q6NS46 1862 aaKnown RBP26.91■■□□□ 1.9
Ccdc34-201ENSMUST00000028580 Hecw1Q8K4P8 1604 aa26.9■■□□□ 1.9
Ccdc34-201ENSMUST00000028580 Trappc8E9PWG2 1437 aa26.9■■□□□ 1.9
Ccdc34-201ENSMUST00000028580 Ppip5k1A2ARP1 1436 aa26.9■■□□□ 1.9
Ccdc34-201ENSMUST00000028580 Grwd1Q810D6 446 aaKnown RBP26.86■■□□□ 1.89
Ccdc34-201ENSMUST00000028580 Abcc3B2RX12 1523 aa26.85■■□□□ 1.89
Ccdc34-201ENSMUST00000028580 Cd109Q8R422 1442 aa26.85■■□□□ 1.89
Ccdc34-201ENSMUST00000028580 Rrp7aQ9D1C9 280 aaKnown RBP26.84■■□□□ 1.89
Ccdc34-201ENSMUST00000028580 Atp7aQ64430 1491 aa26.84■■□□□ 1.89
Ccdc34-201ENSMUST00000028580 Abca8bQ8K440 1620 aa26.83■■□□□ 1.89
Ccdc34-201ENSMUST00000028580 Nolc1E9Q5C9 702 aaKnown RBP26.83■■□□□ 1.89
Ccdc34-201ENSMUST00000028580 Sart1Q9Z315 806 aaKnown RBP26.81■■□□□ 1.88
Ccdc34-201ENSMUST00000028580 Robo2Q7TPD3 1470 aa26.81■■□□□ 1.88
Ccdc34-201ENSMUST00000028580 Setd1aE9PYH6 1716 aa26.8■■□□□ 1.88
Ccdc34-201ENSMUST00000028580 Eif5bQ05D44 1216 aaKnown RBP26.8■■□□□ 1.88
Ccdc34-201ENSMUST00000028580 Tarbp1E9Q368 1579 aa26.77■■□□□ 1.88
Ccdc34-201ENSMUST00000028580 Prdm16A2A935 1275 aa26.77■■□□□ 1.88
Ccdc34-201ENSMUST00000028580 Igf1rQ60751 1373 aa26.75■■□□□ 1.87
Ccdc34-201ENSMUST00000028580 Atp10dQ8K2X1 1416 aa26.75■■□□□ 1.87
Ccdc34-201ENSMUST00000028580 Kdm5cP41230 1554 aa26.75■■□□□ 1.87
Ccdc34-201ENSMUST00000028580 Wdr43Q6ZQL4 677 aaKnown RBP26.74■■□□□ 1.87
Ccdc34-201ENSMUST00000028580 Ythdc2B2RR83 1445 aaKnown RBP26.73■■□□□ 1.87
Ccdc34-201ENSMUST00000028580 Tubgcp6G5E8P0 1769 aa26.73■■□□□ 1.87
Ccdc34-201ENSMUST00000028580 AI481877A2ALV5 1481 aa26.72■■□□□ 1.87
Ccdc34-201ENSMUST00000028580 Adamts13Q769J6 1426 aa26.71■■□□□ 1.87
Ccdc34-201ENSMUST00000028580 Ofd1Q80Z25 1017 aa26.7■■□□□ 1.87
Ccdc34-201ENSMUST00000028580 Cdc42bpbQ7TT50 1713 aa26.7■■□□□ 1.86
Ccdc34-201ENSMUST00000028580 Zmym4A2A791 1549 aaKnown RBP26.69■■□□□ 1.86
Ccdc34-201ENSMUST00000028580 Spag9Q58A65 1321 aaKnown RBP26.68■■□□□ 1.86
Ccdc34-201ENSMUST00000028580 Cep170Q6A065 1588 aa26.68■■□□□ 1.86
Ccdc34-201ENSMUST00000028580 Hdac5Q9Z2V6 1113 aa26.66■■□□□ 1.86
Ccdc34-201ENSMUST00000028580 Edc4Q3UJB9 1406 aaKnown RBP26.64■■□□□ 1.86
Ccdc34-201ENSMUST00000028580 PtprtQ99M80 1454 aa26.63■■□□□ 1.85
Ccdc34-201ENSMUST00000028580 Ppp4r2Q0VGB7 417 aa26.63■■□□□ 1.85
Ccdc34-201ENSMUST00000028580 Supt16hQ920B9 1047 aa26.63■■□□□ 1.85
Ccdc34-201ENSMUST00000028580 P3h3Q8CG70 732 aa26.62■■□□□ 1.85
Ccdc34-201ENSMUST00000028580 Rtl5Q5DTT4 599 aa26.61■■□□□ 1.85
Ccdc34-201ENSMUST00000028580 Pde4cQ3UEI1 686 aa26.61■■□□□ 1.85
Ccdc34-201ENSMUST00000028580 Znf608Q56A10 1511 aa26.61■■□□□ 1.85
Ccdc34-201ENSMUST00000028580 Nsd2Q8BVE8 1365 aa26.6■■□□□ 1.85
Ccdc34-201ENSMUST00000028580 Pelp1Q9DBD5 1123 aaKnown RBP26.59■■□□□ 1.85
Ccdc34-201ENSMUST00000028580 Zbtb7cQ8VCZ7 619 aa26.58■■□□□ 1.85
Ccdc34-201ENSMUST00000028580 Anp32bQ9EST5 272 aaKnown RBP26.58■■□□□ 1.85
Ccdc34-201ENSMUST00000028580 Kidins220E9Q9B7 1793 aa26.57■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 L3mbtl2P59178 703 aa26.57■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 Abca17E9PX95 1733 aa26.57■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 Usp54Q8BL06 1588 aaKnown RBP26.57■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 ShprhQ7TPQ3 1674 aa26.56■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 Ifit1bl1D3Z6F0 470 aa26.55■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 Rpgrip1lQ8CG73 1264 aa26.55■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 Tulp4Q9JIL5 1547 aa26.55■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 Kank1E9Q238 1360 aa26.54■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 Sbno1Q689Z5 1390 aa26.53■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 Zscan21Q07231 555 aa26.53■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 Pabpn1Q8CCS6 302 aaKnown RBP26.53■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 Arid4bA2CG63 1314 aaKnown RBP26.52■■□□□ 1.84
Ccdc34-201ENSMUST00000028580 PrxO55103 1391 aa26.51■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Map3k5O35099 1380 aa26.5■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Plch2A2AP18 1501 aa26.5■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Kif1bQ60575 1816 aaKnown RBP26.5■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Ttbk1Q6PCN3 1308 aa26.49■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Zfyve16Q80U44 1528 aa26.48■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 AnkarA2RT91 1465 aa26.48■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Mink1Q9JM52 1308 aa26.48■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Uggt2E9Q4X2 1504 aa26.47■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Pola1P33609 1465 aa26.47■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Mak16Q8BGS0 296 aaKnown RBP26.46■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Ylpm1Q9R0I7 1386 aaKnown RBP26.46■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Mroh3A0A1D5RM54 893 aa26.46■■□□□ 1.83
Ccdc34-201ENSMUST00000028580 Xrn1P97789 1719 aaKnown RBP26.45■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Pank3Q8R2W9 370 aa26.45■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Tex14Q7M6U3 1450 aa26.45■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Ifnlr1Q8CGK5 535 aa26.43■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Abcc6Q9R1S7 1498 aa26.43■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Abca9Q8K449 1623 aa26.42■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Upf2A2AT37 1269 aaKnown RBP26.42■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Liat1Q810M6 228 aa26.42■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Erbb3Q61526 1339 aa26.41■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Zfp444Q3TDV8 331 aaKnown RBP26.4■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Zscan10Q3URR7 782 aa26.4■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Nos1Q9Z0J4 1429 aa26.39■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Tmf1B9EKI3 1091 aa26.39■■□□□ 1.82
Ccdc34-201ENSMUST00000028580 Q7TT23 1179 aa26.38■■□□□ 1.81
Ccdc34-201ENSMUST00000028580 Inpp5dQ9ES52 1191 aa26.38■■□□□ 1.81
Ccdc34-201ENSMUST00000028580 Gm16486A0A1D5RMD1 1434 aa26.37■■□□□ 1.81
Ccdc34-201ENSMUST00000028580 Tmem131lQ3U3D7 1597 aa26.35■■□□□ 1.81
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms