RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Iqgap1Q9JKF1 1657 aaKnown RBP24.93■■□□□ 1.58
Ccdc3-201ENSMUST00000027988 Cpsf1Q9EPU4 1441 aaKnown RBP24.92■■□□□ 1.58
Ccdc3-201ENSMUST00000027988 Fam208aQ69ZR9 1610 aaKnown RBP24.9■■□□□ 1.58
Ccdc3-201ENSMUST00000027988 Rrp7aQ9D1C9 280 aaKnown RBP24.89■■□□□ 1.58
Ccdc3-201ENSMUST00000027988 Lrrc9Q8CDN9 1456 aa24.89■■□□□ 1.58
Ccdc3-201ENSMUST00000027988 Trappc8E9PWG2 1437 aa24.89■■□□□ 1.58
Ccdc3-201ENSMUST00000027988 Rusc2Q80U22 1514 aa24.89■■□□□ 1.58
Ccdc3-201ENSMUST00000027988 DroshaQ5HZJ0 1373 aaKnown RBP24.89■■□□□ 1.57
Ccdc3-201ENSMUST00000027988 PtprgQ05909 1442 aa24.88■■□□□ 1.57
Ccdc3-201ENSMUST00000027988 Polr3aB2RXC6 1390 aa24.88■■□□□ 1.57
Ccdc3-201ENSMUST00000027988 Fancd2Q80V62 1450 aa24.87■■□□□ 1.57
Ccdc3-201ENSMUST00000027988 Rpgrip1lQ8CG73 1264 aa24.87■■□□□ 1.57
Ccdc3-201ENSMUST00000027988 AknaQ80VW7 1404 aa24.85■■□□□ 1.57
Ccdc3-201ENSMUST00000027988 Erbb3Q61526 1339 aa24.84■■□□□ 1.57
Ccdc3-201ENSMUST00000027988 Adgrl2Q8JZZ7 1487 aa24.82■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Egfem1Q8C088 590 aa24.82■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Atp7aQ64430 1491 aa24.82■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Gm32742A0A1B0GT42 1604 aa24.81■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Q7TT23 1179 aa24.8■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Tarbp1E9Q368 1579 aa24.8■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Arhgap5P97393 1501 aa24.8■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Cd109Q8R422 1442 aa24.79■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Tubgcp6G5E8P0 1769 aa24.79■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Rock1P70335 1354 aa24.79■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Sart1Q9Z315 806 aaKnown RBP24.79■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Rock2P70336 1388 aa24.78■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Rrbp1Q99PL5 1605 aaKnown RBP24.78■■□□□ 1.56
Ccdc3-201ENSMUST00000027988 Kdm5cP41230 1554 aa24.76■■□□□ 1.55
Ccdc3-201ENSMUST00000027988 Ifit1bl1D3Z6F0 470 aa24.72■■□□□ 1.55
Ccdc3-201ENSMUST00000027988 Zfp444Q3TDV8 331 aaKnown RBP24.72■■□□□ 1.55
Ccdc3-201ENSMUST00000027988 Ttbk1Q6PCN3 1308 aa24.72■■□□□ 1.55
Ccdc3-201ENSMUST00000027988 Gapvd1Q6PAR5 1458 aa24.72■■□□□ 1.55
Ccdc3-201ENSMUST00000027988 Eif4g3Q80XI3 1579 aaKnown RBP24.71■■□□□ 1.55
Ccdc3-201ENSMUST00000027988 Adamts13Q769J6 1426 aa24.7■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Rtl5Q5DTT4 599 aa24.68■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Ifnlr1Q8CGK5 535 aa24.68■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Mast1Q9R1L5 1570 aa24.67■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Kank1E9Q238 1360 aa24.67■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Rnf17Q99MV7 1640 aa24.67■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Pank3Q8R2W9 370 aa24.67■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Zscan21Q07231 555 aa24.66■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Clstn2Q9ER65 966 aa24.66■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 PrxO55103 1391 aa24.65■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Rad21Q61550 635 aaKnown RBP24.65■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Inpp5dQ9ES52 1191 aa24.65■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Setd1aE9PYH6 1716 aa24.65■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Cdc42bpbQ7TT50 1713 aa24.64■■□□□ 1.54
Ccdc3-201ENSMUST00000027988 Fgd6Q69ZL1 1399 aa24.62■■□□□ 1.53
Ccdc3-201ENSMUST00000027988 Pdcd11Q6NS46 1862 aaKnown RBP24.62■■□□□ 1.53
Ccdc3-201ENSMUST00000027988 Map3k5O35099 1380 aa24.61■■□□□ 1.53
Ccdc3-201ENSMUST00000027988 Mak16Q8BGS0 296 aaKnown RBP24.6■■□□□ 1.53
Ccdc3-201ENSMUST00000027988 Spag9Q58A65 1321 aaKnown RBP24.59■■□□□ 1.53
Ccdc3-201ENSMUST00000027988 Bcl11aQ9QYE3 773 aa24.59■■□□□ 1.53
Ccdc3-201ENSMUST00000027988 Pde4cQ3UEI1 686 aa24.58■■□□□ 1.53
Ccdc3-201ENSMUST00000027988 Gm14025A2AP89 1413 aa24.58■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Edc4Q3UJB9 1406 aaKnown RBP24.57■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Plch2A2AP18 1501 aa24.55■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Robo2Q7TPD3 1470 aa24.55■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Tcerg1Q8CGF7 1100 aaKnown RBP24.55■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Pelp1Q9DBD5 1123 aaKnown RBP24.54■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 AI481877A2ALV5 1481 aa24.54■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Abcc3B2RX12 1523 aa24.54■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Ppip5k1A2ARP1 1436 aa24.53■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Zmym4A2A791 1549 aaKnown RBP24.53■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Sall3Q62255 1320 aa24.53■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Cfap74Q3UY96 1578 aa24.53■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Mroh3A0A1D5RM54 893 aa24.53■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Tulp4Q9JIL5 1547 aa24.53■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 NhsB1AV60 1647 aa24.53■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Cep170Q6A065 1588 aa24.52■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Zscan10Q3URR7 782 aa24.52■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Neurl4Q5NCX5 1563 aa24.52■■□□□ 1.52
Ccdc3-201ENSMUST00000027988 Esx1O88933 382 aa24.51■■□□□ 1.51
Ccdc3-201ENSMUST00000027988 Anp32bQ9EST5 272 aaKnown RBP24.5■■□□□ 1.51
Ccdc3-201ENSMUST00000027988 Erich6D3Z6S9 713 aa24.49■■□□□ 1.51
Ccdc3-201ENSMUST00000027988 Ak9G3UYQ4 1894 aa24.49■■□□□ 1.51
Ccdc3-201ENSMUST00000027988 Hecw1Q8K4P8 1604 aa24.49■■□□□ 1.51
Ccdc3-201ENSMUST00000027988 Znf608Q56A10 1511 aa24.48■■□□□ 1.51
Ccdc3-201ENSMUST00000027988 Usp54Q8BL06 1588 aaKnown RBP24.48■■□□□ 1.51
Ccdc3-201ENSMUST00000027988 Kdm2aP59997 1161 aa24.48■■□□□ 1.51
Ccdc3-201ENSMUST00000027988 ShprhQ7TPQ3 1674 aa24.47■■□□□ 1.51
Ccdc3-201ENSMUST00000027988 Slc4a1apE9PX68 744 aa24.47■■□□□ 1.51
Ccdc3-201ENSMUST00000027988 Tex14Q7M6U3 1450 aa24.46■■□□□ 1.51
Ccdc3-201ENSMUST00000027988 Atp10dQ8K2X1 1416 aa24.44■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 CrbnQ8C7D2 445 aa24.43■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Mink1Q9JM52 1308 aa24.42■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Kidins220E9Q9B7 1793 aa24.42■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Chd1P40201 1711 aa24.42■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Prdm16A2A935 1275 aa24.42■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Tmf1B9EKI3 1091 aa24.42■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Abca8bQ8K440 1620 aa24.41■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Ppp2r1aQ76MZ3 589 aa24.41■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Abcc1O35379 1528 aa24.4■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Kif1bQ60575 1816 aaKnown RBP24.4■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Srcin1Q9QWI6 1250 aa24.4■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Ipo9Q91YE6 1041 aa24.39■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Gm16486A0A1D5RMD1 1434 aa24.39■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Xrn1P97789 1719 aaKnown RBP24.39■■□□□ 1.5
Ccdc3-201ENSMUST00000027988 Prkrip1Q9CWV6 186 aaKnown RBP24.39■■□□□ 1.49
Ccdc3-201ENSMUST00000027988 Kiaa1210E9Q0C6 1637 aa24.38■■□□□ 1.49
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms