RNA–Protein interactions for RNA: ENSMUST00000023070.5

Upk3a-201, Transcript of Uroplakin-3a, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3a, Length 1,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3a-201ENSMUST00000023070 Naip5Q9R016 1403 aa25.39■■□□□ 1.66
Upk3a-201ENSMUST00000023070 Gm13697A2AK42 830 aa25.38■■□□□ 1.65
Upk3a-201ENSMUST00000023070 Uggt2E9Q4X2 1504 aa25.37■■□□□ 1.65
Upk3a-201ENSMUST00000023070 Med14A2ABV5 1459 aaKnown RBP25.36■■□□□ 1.65
Upk3a-201ENSMUST00000023070 GphnQ8BUV3 769 aaKnown RBP25.35■■□□□ 1.65
Upk3a-201ENSMUST00000023070 Cabp1Q9JLK7 227 aa25.35■■□□□ 1.65
Upk3a-201ENSMUST00000023070 Spag9Q58A65 1321 aaKnown RBP25.35■■□□□ 1.65
Upk3a-201ENSMUST00000023070 Plekhh2Q8C115 1491 aa25.34■■□□□ 1.65
Upk3a-201ENSMUST00000023070 Ltbp4Q8K4G1 1666 aa25.34■■□□□ 1.65
Upk3a-201ENSMUST00000023070 Topbp1Q6ZQF0 1515 aa25.33■■□□□ 1.65
Upk3a-201ENSMUST00000023070 Ncoa1P70365 1447 aa25.33■■□□□ 1.65
Upk3a-201ENSMUST00000023070 Plch2A2AP18 1501 aa25.32■■□□□ 1.64
Upk3a-201ENSMUST00000023070 Zbtb7cQ8VCZ7 619 aa25.31■■□□□ 1.64
Upk3a-201ENSMUST00000023070 Arhgap23Q69ZH9 1483 aa25.31■■□□□ 1.64
Upk3a-201ENSMUST00000023070 Il16O54824 1322 aa25.25■■□□□ 1.63
Upk3a-201ENSMUST00000023070 Abca17E9PX95 1733 aa25.24■■□□□ 1.63
Upk3a-201ENSMUST00000023070 Adgrl2Q8JZZ7 1487 aa25.24■■□□□ 1.63
Upk3a-201ENSMUST00000023070 3425401B19RikD3Z1D3 1412 aa25.24■■□□□ 1.63
Upk3a-201ENSMUST00000023070 Ecm2Q5FW85 670 aa25.24■■□□□ 1.63
Upk3a-201ENSMUST00000023070 Chic2Q9D9G3 165 aa25.24■■□□□ 1.63
Upk3a-201ENSMUST00000023070 Usp54Q8BL06 1588 aaKnown RBP25.2■■□□□ 1.62
Upk3a-201ENSMUST00000023070 Ssh2Q5SW75 1423 aa25.2■■□□□ 1.62
Upk3a-201ENSMUST00000023070 Abcc6Q9R1S7 1498 aa25.19■■□□□ 1.62
Upk3a-201ENSMUST00000023070 Hfm1D3Z4R1 1434 aa25.19■■□□□ 1.62
Upk3a-201ENSMUST00000023070 Rimbp3Q3V0F0 1606 aa25.19■■□□□ 1.62
Upk3a-201ENSMUST00000023070 Adgrb2Q8CGM1 1561 aa25.18■■□□□ 1.62
Upk3a-201ENSMUST00000023070 Scaf11E9PZM7 1456 aaKnown RBP25.16■■□□□ 1.62
Upk3a-201ENSMUST00000023070 Hnrnpul2Q00PI9 745 aaKnown RBP25.16■■□□□ 1.62
Upk3a-201ENSMUST00000023070 Vps8Q0P5W1 1427 aa25.16■■□□□ 1.62
Upk3a-201ENSMUST00000023070 Rapgef3Q8VCC8 918 aa25.14■■□□□ 1.62
Upk3a-201ENSMUST00000023070 Phlpp1Q8CHE4 1687 aa25.13■■□□□ 1.61
Upk3a-201ENSMUST00000023070 Pde4cQ3UEI1 686 aa25.12■■□□□ 1.61
Upk3a-201ENSMUST00000023070 DroshaQ5HZJ0 1373 aaKnown RBP25.09■■□□□ 1.61
Upk3a-201ENSMUST00000023070 AlkP97793 1621 aa25.08■■□□□ 1.61
Upk3a-201ENSMUST00000023070 ShprhQ7TPQ3 1674 aa25.08■■□□□ 1.61
Upk3a-201ENSMUST00000023070 Kdm3bQ6ZPY7 1562 aa25.08■■□□□ 1.61
Upk3a-201ENSMUST00000023070 Hspa1lP16627 641 aa25.07■■□□□ 1.6
Upk3a-201ENSMUST00000023070 Adamts7Q68SA9 1657 aa25.06■■□□□ 1.6
Upk3a-201ENSMUST00000023070 Myo5cE9Q1F5 1742 aa25.06■■□□□ 1.6
Upk3a-201ENSMUST00000023070 Gli3Q61602 1583 aa25.05■■□□□ 1.6
Upk3a-201ENSMUST00000023070 Prex1Q69ZK0 1650 aa25.04■■□□□ 1.6
Upk3a-201ENSMUST00000023070 Robo2Q7TPD3 1470 aa25.04■■□□□ 1.6
Upk3a-201ENSMUST00000023070 Rims2Q9EQZ7 1530 aa25.03■■□□□ 1.6
Upk3a-201ENSMUST00000023070 Arid4bA2CG63 1314 aaKnown RBP25.03■■□□□ 1.6
Upk3a-201ENSMUST00000023070 Kif1bQ60575 1816 aaKnown RBP25■■□□□ 1.59
Upk3a-201ENSMUST00000023070 Chd2E9PZM4 1827 aaKnown RBP25■■□□□ 1.59
Upk3a-201ENSMUST00000023070 Iqsec2Q5DU25 1478 aa24.99■■□□□ 1.59
Upk3a-201ENSMUST00000023070 NclP09405 707 aaKnown RBP24.98■■□□□ 1.59
Upk3a-201ENSMUST00000023070 Fhad1A6PWD2 1420 aa24.96■■□□□ 1.59
Upk3a-201ENSMUST00000023070 PzpQ61838 1495 aa24.96■■□□□ 1.59
Upk3a-201ENSMUST00000023070 Ttc21bQ0HA38 1315 aa24.94■■□□□ 1.58
Upk3a-201ENSMUST00000023070 Gemin5Q8BX17 1502 aaKnown RBP24.92■■□□□ 1.58
Upk3a-201ENSMUST00000023070 Adgrb3Q80ZF8 1522 aa24.91■■□□□ 1.58
Upk3a-201ENSMUST00000023070 Akap12Q9WTQ5 1684 aa24.91■■□□□ 1.58
Upk3a-201ENSMUST00000023070 Fam50aQ9WV03 339 aaKnown RBP24.91■■□□□ 1.58
Upk3a-201ENSMUST00000023070 Clstn2Q9ER65 966 aa24.89■■□□□ 1.58
Upk3a-201ENSMUST00000023070 Asxl1P59598 1514 aa24.89■■□□□ 1.57
Upk3a-201ENSMUST00000023070 Map4P27546 1125 aaKnown RBP24.87■■□□□ 1.57
Upk3a-201ENSMUST00000023070 GapdhsQ64467 440 aa24.87■■□□□ 1.57
Upk3a-201ENSMUST00000023070 UacaQ8CGB3 1411 aa24.86■■□□□ 1.57
Upk3a-201ENSMUST00000023070 Nrxn3Q6P9K9 1571 aa24.86■■□□□ 1.57
Upk3a-201ENSMUST00000023070 Txndc2Q6P902 515 aa24.86■■□□□ 1.57
Upk3a-201ENSMUST00000023070 Kdm5aQ3UXZ9 1690 aa24.85■■□□□ 1.57
Upk3a-201ENSMUST00000023070 Bcl11bQ99PV8 884 aa24.85■■□□□ 1.57
Upk3a-201ENSMUST00000023070 Iqgap1Q9JKF1 1657 aaKnown RBP24.85■■□□□ 1.57
Upk3a-201ENSMUST00000023070 Nup155Q99P88 1391 aaKnown RBP24.84■■□□□ 1.57
Upk3a-201ENSMUST00000023070 Skint5A7XUY5 1461 aa24.82■■□□□ 1.56
Upk3a-201ENSMUST00000023070 Ylpm1Q9R0I7 1386 aaKnown RBP24.81■■□□□ 1.56
Upk3a-201ENSMUST00000023070 Zfp644E9QA22 1323 aa24.81■■□□□ 1.56
Upk3a-201ENSMUST00000023070 Zc3h13E9Q784 1729 aaKnown RBP24.8■■□□□ 1.56
Upk3a-201ENSMUST00000023070 Tmem131lQ3U3D7 1597 aa24.8■■□□□ 1.56
Upk3a-201ENSMUST00000023070 AnkarA2RT91 1465 aa24.79■■□□□ 1.56
Upk3a-201ENSMUST00000023070 Rfx7F8VPJ6 1459 aa24.79■■□□□ 1.56
Upk3a-201ENSMUST00000023070 Tubgcp6G5E8P0 1769 aa24.77■■□□□ 1.56
Upk3a-201ENSMUST00000023070 UbtfP25976 765 aaKnown RBP24.77■■□□□ 1.56
Upk3a-201ENSMUST00000023070 Kif13aQ9EQW7 1749 aa24.76■■□□□ 1.55
Upk3a-201ENSMUST00000023070 Myom3A2ABU4 1439 aa24.75■■□□□ 1.55
Upk3a-201ENSMUST00000023070 Itsn1Q9Z0R4 1714 aa24.75■■□□□ 1.55
Upk3a-201ENSMUST00000023070 Lamc1P02468 1607 aaKnown RBP24.73■■□□□ 1.55
Upk3a-201ENSMUST00000023070 Naip7Q9JIB3 1402 aa24.72■■□□□ 1.55
Upk3a-201ENSMUST00000023070 Psme1P97371 249 aa24.71■■□□□ 1.55
Upk3a-201ENSMUST00000023070 P3h3Q8CG70 732 aa24.71■■□□□ 1.55
Upk3a-201ENSMUST00000023070 Nsd2Q8BVE8 1365 aa24.7■■□□□ 1.55
Upk3a-201ENSMUST00000023070 Med1Q925J9 1575 aa24.68■■□□□ 1.54
Upk3a-201ENSMUST00000023070 Gm13695A2AK44 830 aa24.68■■□□□ 1.54
Upk3a-201ENSMUST00000023070 Erich6D3Z6S9 713 aa24.68■■□□□ 1.54
Upk3a-201ENSMUST00000023070 Ino80Q6ZPV2 1559 aa24.67■■□□□ 1.54
Upk3a-201ENSMUST00000023070 Ttll5Q8CHB8 1328 aa24.67■■□□□ 1.54
Upk3a-201ENSMUST00000023070 Amigo3Q8C2S7 508 aa24.67■■□□□ 1.54
Upk3a-201ENSMUST00000023070 Efcab6Q6P1E8 1516 aa24.66■■□□□ 1.54
Upk3a-201ENSMUST00000023070 Cd109Q8R422 1442 aa24.64■■□□□ 1.54
Upk3a-201ENSMUST00000023070 IghaA0A0A6YXW6 389 aa24.64■■□□□ 1.54
Upk3a-201ENSMUST00000023070 Ube2uB1AUC4 352 aa24.64■■□□□ 1.54
Upk3a-201ENSMUST00000023070 Stk24Q99KH8 431 aa24.64■■□□□ 1.54
Upk3a-201ENSMUST00000023070 Eif2ak4Q9QZ05 1648 aa24.62■■□□□ 1.53
Upk3a-201ENSMUST00000023070 Tecpr2Q3UH45 1423 aa24.61■■□□□ 1.53
Upk3a-201ENSMUST00000023070 Cypt1Q8CH20 168 aa24.6■■□□□ 1.53
Upk3a-201ENSMUST00000023070 Lmtk3Q5XJV6 1424 aa24.6■■□□□ 1.53
Upk3a-201ENSMUST00000023070 Trak1Q6PD31 939 aa24.57■■□□□ 1.52
Upk3a-201ENSMUST00000023070 PalldQ9ET54 1408 aa24.57■■□□□ 1.52
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms