RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Arhgap5P97393 1501 aa20.47■□□□□ 0.87
Nkx3-1-201ENSMUST00000022646 Clstn2Q9ER65 966 aa20.45■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Trappc8E9PWG2 1437 aa20.44■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Asxl1P59598 1514 aa20.44■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Polr3aB2RXC6 1390 aa20.44■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Fgd6Q69ZL1 1399 aa20.44■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Rock2P70336 1388 aa20.42■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Ppp4r2Q0VGB7 417 aa20.42■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Wdr43Q6ZQL4 677 aaKnown RBP20.42■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Sart1Q9Z315 806 aaKnown RBP20.42■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Eif4g3Q80XI3 1579 aaKnown RBP20.42■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Rock1P70335 1354 aa20.42■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Iqgap1Q9JKF1 1657 aaKnown RBP20.42■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Gm32742A0A1B0GT42 1604 aa20.41■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Ofd1Q80Z25 1017 aa20.4■□□□□ 0.86
Nkx3-1-201ENSMUST00000022646 Cd109Q8R422 1442 aa20.39■□□□□ 0.85
Nkx3-1-201ENSMUST00000022646 Rnf17Q99MV7 1640 aa20.38■□□□□ 0.85
Nkx3-1-201ENSMUST00000022646 Gm14025A2AP89 1413 aa20.37■□□□□ 0.85
Nkx3-1-201ENSMUST00000022646 Atp7aQ64430 1491 aa20.37■□□□□ 0.85
Nkx3-1-201ENSMUST00000022646 Mast1Q9R1L5 1570 aa20.36■□□□□ 0.85
Nkx3-1-201ENSMUST00000022646 Zbtb4Q5F293 982 aa20.36■□□□□ 0.85
Nkx3-1-201ENSMUST00000022646 Supt16hQ920B9 1047 aa20.34■□□□□ 0.85
Nkx3-1-201ENSMUST00000022646 Cfap74Q3UY96 1578 aa20.31■□□□□ 0.84
Nkx3-1-201ENSMUST00000022646 Tarbp1E9Q368 1579 aa20.3■□□□□ 0.84
Nkx3-1-201ENSMUST00000022646 Neurl4Q5NCX5 1563 aa20.3■□□□□ 0.84
Nkx3-1-201ENSMUST00000022646 Pdcd11Q6NS46 1862 aaKnown RBP20.29■□□□□ 0.84
Nkx3-1-201ENSMUST00000022646 Ifit1bl1D3Z6F0 470 aa20.28■□□□□ 0.84
Nkx3-1-201ENSMUST00000022646 Spag9Q58A65 1321 aaKnown RBP20.28■□□□□ 0.84
Nkx3-1-201ENSMUST00000022646 L3mbtl2P59178 703 aa20.27■□□□□ 0.84
Nkx3-1-201ENSMUST00000022646 Rpgrip1lQ8CG73 1264 aa20.27■□□□□ 0.84
Nkx3-1-201ENSMUST00000022646 Gapvd1Q6PAR5 1458 aa20.26■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Kdm5cP41230 1554 aa20.26■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 NhsB1AV60 1647 aa20.25■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Hecw1Q8K4P8 1604 aa20.25■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Cdc42bpbQ7TT50 1713 aa20.24■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Ppip5k1A2ARP1 1436 aa20.24■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Anp32bQ9EST5 272 aaKnown RBP20.24■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 AI481877A2ALV5 1481 aa20.24■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Abcc3B2RX12 1523 aa20.24■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Setd1aE9PYH6 1716 aa20.23■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Pde4cQ3UEI1 686 aa20.23■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Prdm16A2A935 1275 aa20.22■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Kiaa1210E9Q0C6 1637 aa20.22■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Map3k5O35099 1380 aa20.22■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Abcc1O35379 1528 aa20.21■□□□□ 0.83
Nkx3-1-201ENSMUST00000022646 Tubgcp6G5E8P0 1769 aa20.2■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Adamts13Q769J6 1426 aa20.2■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Atp10dQ8K2X1 1416 aa20.2■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Mroh3A0A1D5RM54 893 aa20.2■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Zscan21Q07231 555 aa20.19■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Robo2Q7TPD3 1470 aa20.18■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Q7TT23 1179 aa20.18■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Pank3Q8R2W9 370 aa20.18■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Ttbk1Q6PCN3 1308 aa20.18■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Edc4Q3UJB9 1406 aaKnown RBP20.17■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Chd1P40201 1711 aa20.17■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Abca8bQ8K440 1620 aa20.17■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Cep170Q6A065 1588 aa20.17■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 PrxO55103 1391 aa20.16■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Rtl5Q5DTT4 599 aa20.16■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Ifnlr1Q8CGK5 535 aa20.15■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Inpp5dQ9ES52 1191 aa20.15■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Erich6D3Z6S9 713 aa20.14■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Slc4a3P16283 1227 aa20.14■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Liat1Q810M6 228 aa20.14■□□□□ 0.82
Nkx3-1-201ENSMUST00000022646 Kcnh8P59111 1102 aa20.14■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Mak16Q8BGS0 296 aaKnown RBP20.14■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Usp54Q8BL06 1588 aaKnown RBP20.13■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Zfp444Q3TDV8 331 aaKnown RBP20.13■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Erbb3Q61526 1339 aa20.12■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Pelp1Q9DBD5 1123 aaKnown RBP20.11■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Kank1E9Q238 1360 aa20.11■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Nsd2Q8BVE8 1365 aa20.11■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Tulp4Q9JIL5 1547 aa20.11■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Znf608Q56A10 1511 aa20.11■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Hdac5Q9Z2V6 1113 aa20.11■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Kif1bQ60575 1816 aaKnown RBP20.1■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 ShprhQ7TPQ3 1674 aa20.1■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Pak3Q61036 559 aa20.1■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Kidins220E9Q9B7 1793 aa20.09■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Zscan10Q3URR7 782 aa20.09■□□□□ 0.81
Nkx3-1-201ENSMUST00000022646 Kdm2aP59997 1161 aa20.08■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Tmf1B9EKI3 1091 aa20.07■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Rad21Q61550 635 aaKnown RBP20.07■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Srcin1Q9QWI6 1250 aa20.06■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Plch2A2AP18 1501 aa20.06■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Zmym4A2A791 1549 aaKnown RBP20.05■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Sall3Q62255 1320 aa20.05■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Abca17E9PX95 1733 aa20.05■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Abcc6Q9R1S7 1498 aa20.03■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Xrn1P97789 1719 aaKnown RBP20.03■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Upf2A2AT37 1269 aaKnown RBP20.03■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Slc4a1apE9PX68 744 aa20.03■□□□□ 0.8
Nkx3-1-201ENSMUST00000022646 Sbno1Q689Z5 1390 aa20.01■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Igf1rQ60751 1373 aa20.01■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Kif3bQ61771 747 aa20.01■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Tcerg1Q8CGF7 1100 aaKnown RBP20.01■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Tex14Q7M6U3 1450 aa20■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Ylpm1Q9R0I7 1386 aaKnown RBP20■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Os9Q8K2C7 672 aa19.99■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms