RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C SCL1P21243 252 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C EXG1P23776 448 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C RSA4P25382 515 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C FUB1P25659 250 aa3.07□□□□□ -1.92
YIR040CYIR040C ERV1P27882 189 aa3.07□□□□□ -1.92
YIR040CYIR040C YIM1P28625 365 aa3.07□□□□□ -1.92
YIR040CYIR040C SUA7P29055 345 aaPredicted RBP3.07□□□□□ -1.92
YIR040CYIR040C TRR1P29509 319 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C NTH1P32356 751 aa3.07□□□□□ -1.92
YIR040CYIR040C MDH3P32419 343 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
YIR040CYIR040C HXT4P32467 576 aa3.07□□□□□ -1.92
YIR040CYIR040C CDC13P32797 924 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C PEX2P32800 271 aa3.07□□□□□ -1.92
YIR040CYIR040C PPZ2P33329 710 aa3.07□□□□□ -1.92
YIR040CYIR040C SKG1P36169 355 aa3.07□□□□□ -1.92
YIR040CYIR040C MRPL3P36516 390 aa3.07□□□□□ -1.92
YIR040CYIR040C REG2P38232 338 aa3.07□□□□□ -1.92
YIR040CYIR040C SHG1P38337 142 aa3.07□□□□□ -1.92
YIR040CYIR040C EFM1P38732 585 aa3.07□□□□□ -1.92
YIR040CYIR040C WSC4P38739 605 aa3.07□□□□□ -1.92
YIR040CYIR040C GPI16P38875 610 aa3.07□□□□□ -1.92
YIR040CYIR040C NPT1P39683 429 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C EXO1P39875 702 aa3.07□□□□□ -1.92
YIR040CYIR040C AST2P39945 430 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C COX15P40086 486 aa3.07□□□□□ -1.92
YIR040CYIR040C PUG1P40100 303 aa3.07□□□□□ -1.92
YIR040CYIR040C MAM33P40513 266 aa3.07□□□□□ -1.92
YIR040CYIR040C BIR1P47134 954 aa3.07□□□□□ -1.92
YIR040CYIR040C MAL13P53338 473 aa3.07□□□□□ -1.92
YIR040CYIR040C SPC98P53540 846 aa3.07□□□□□ -1.92
YIR040CYIR040C CPR6P53691 371 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C CAF40P53829 373 aa3.07□□□□□ -1.92
YIR040CYIR040C RHO5P53879 331 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C YNL140CP53910 189 aa3.07□□□□□ -1.92
YIR040CYIR040C COG5P53951 403 aa3.07□□□□□ -1.92
YIR040CYIR040C MOT3P54785 490 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C YCL001W-AP87012 153 aa3.07□□□□□ -1.92
YIR040CYIR040C APS2Q00381 147 aa3.07□□□□□ -1.92
YIR040CYIR040C LGE1Q02796 332 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C ATG21Q02887 496 aa3.07□□□□□ -1.92
YIR040CYIR040C YDR541CQ03049 344 aa3.07□□□□□ -1.92
YIR040CYIR040C YML122CQ03207 126 aa3.07□□□□□ -1.92
YIR040CYIR040C YDR179W-AQ03983 463 aa3.07□□□□□ -1.92
YIR040CYIR040C PPN1Q04119 674 aa3.07□□□□□ -1.92
YIR040CYIR040C MYO5Q04439 1219 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C CSM3Q04659 317 aa3.07□□□□□ -1.92
YIR040CYIR040C RRG8Q06109 277 aa3.07□□□□□ -1.92
YIR040CYIR040C YPR078CQ06813 372 aa3.07□□□□□ -1.92
YIR040CYIR040C STP4Q07351 490 aa3.07□□□□□ -1.92
YIR040CYIR040C SAM4Q08985 325 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C SLF1Q12034 447 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C WTM1Q12363 437 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C YOL159C-AQ3E769 90 aa3.07□□□□□ -1.92
YIR040CYIR040C YHR213W-AQ8TGT4 77 aa3.07□□□□□ -1.92
YIR040CYIR040C LYS2P07702 1392 aa3.07□□□□□ -1.92
YIR040CYIR040C TY1B-DR4Q07793 1604 aa3.07□□□□□ -1.92
YIR040CYIR040C THP2O13539 261 aaKnown RBP3.06□□□□□ -1.92
YIR040CYIR040C YPT1P01123 206 aaKnown RBP3.06□□□□□ -1.92
YIR040CYIR040C CDC7P06243 507 aa3.06□□□□□ -1.92
YIR040CYIR040C RPS21AP0C0V8 87 aaKnown RBP3.06□□□□□ -1.92
YIR040CYIR040C MRP1P10662 321 aaKnown RBP3.06□□□□□ -1.92
YIR040CYIR040C REV3P14284 1504 aa3.06□□□□□ -1.92
YIR040CYIR040C BET2P20133 325 aa3.06□□□□□ -1.92
YIR040CYIR040C CCA1P21269 546 aa3.06□□□□□ -1.92
YIR040CYIR040C PRE1P22141 198 aaKnown RBP3.06□□□□□ -1.92
YIR040CYIR040C VPS15P22219 1454 aa3.06□□□□□ -1.92
YIR040CYIR040C URE2P23202 354 aaKnown RBP3.06□□□□□ -1.92
YIR040CYIR040C RRT12P25381 491 aa3.06□□□□□ -1.92
YIR040CYIR040C MGR1P25573 417 aa3.06□□□□□ -1.92
YIR040CYIR040C CDC50P25656 391 aa3.06□□□□□ -1.92
YIR040CYIR040C CWP1P28319 239 aa3.06□□□□□ -1.92
YIR040CYIR040C UFD4P33202 1483 aa3.06□□□□□ -1.92
YIR040CYIR040C HSL1P34244 1518 aa3.06□□□□□ -1.92
YIR040CYIR040C TAF14P35189 244 aa3.06□□□□□ -1.92
YIR040CYIR040C CBT1P36038 271 aaPredicted RBP3.06□□□□□ -1.92
YIR040CYIR040C TUL1P36096 758 aa3.06□□□□□ -1.92
YIR040CYIR040C NTR2P36118 322 aaPredicted RBP3.06□□□□□ -1.92
YIR040CYIR040C YKR075CP36155 307 aa3.06□□□□□ -1.92
YIR040CYIR040C TVP38P36164 337 aa3.06□□□□□ -1.92
YIR040CYIR040C RIB1P38066 345 aa3.06□□□□□ -1.92
YIR040CYIR040C SRO77P38163 1010 aa3.06□□□□□ -1.92
YIR040CYIR040C BNA4P38169 460 aa3.06□□□□□ -1.92
YIR040CYIR040C ECM13P38195 257 aa3.06□□□□□ -1.92
YIR040CYIR040C CHL4P38907 458 aa3.06□□□□□ -1.92
YIR040CYIR040C PSD1P39006 500 aa3.06□□□□□ -1.92
YIR040CYIR040C YEL020CP39994 560 aa3.06□□□□□ -1.92
YIR040CYIR040C MIT1P40002 666 aa3.06□□□□□ -1.92
YIR040CYIR040C RFC2P40348 353 aa3.06□□□□□ -1.92
YIR040CYIR040C HYR1P40581 163 aaKnown RBP3.06□□□□□ -1.92
YIR040CYIR040C BUD8P41698 603 aa3.06□□□□□ -1.92
YIR040CYIR040C PMT6P42934 759 aa3.06□□□□□ -1.92
YIR040CYIR040C YJL107CP42947 387 aa3.06□□□□□ -1.92
YIR040CYIR040C SWP82P43554 623 aa3.06□□□□□ -1.92
YIR040CYIR040C FMP33P46998 180 aa3.06□□□□□ -1.92
YIR040CYIR040C AAD10P47182 288 aa3.06□□□□□ -1.92
YIR040CYIR040C YPT11P48559 417 aa3.06□□□□□ -1.92
YIR040CYIR040C APT1P49435 187 aaKnown RBP3.06□□□□□ -1.92
YIR040CYIR040C DIA3P52290 468 aa3.06□□□□□ -1.92
YIR040CYIR040C NBP35P52920 328 aa3.06□□□□□ -1.92
YIR040CYIR040C NMA2P53204 395 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms