RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W PFA5Q03289 374 aa3.48□□□□□ -1.85
TSR1YDL060W DYN3Q04949 312 aa3.48□□□□□ -1.85
TSR1YDL060W SYO1Q07395 620 aa3.48□□□□□ -1.85
TSR1YDL060W SOR2Q07786 357 aa3.48□□□□□ -1.85
TSR1YDL060W YOR289WQ12012 251 aaPredicted RBP3.48□□□□□ -1.85
TSR1YDL060W ATP14Q12349 124 aa3.48□□□□□ -1.85
TSR1YDL060W EMP46Q12396 444 aa3.48□□□□□ -1.85
TSR1YDL060W DCP1Q12517 231 aaPredicted RBP3.48□□□□□ -1.85
TSR1YDL060W LSO2Q3E772 92 aaKnown RBP3.48□□□□□ -1.85
TSR1YDL060W SMY1P32364 656 aaKnown RBP3.47□□□□□ -1.85
TSR1YDL060W PRP21P32524 280 aaPredicted RBP3.47□□□□□ -1.85
TSR1YDL060W RRN10P38204 145 aa3.47□□□□□ -1.85
TSR1YDL060W YHR045WP38775 560 aa3.47□□□□□ -1.85
TSR1YDL060W ATM1P40416 690 aa3.47□□□□□ -1.85
TSR1YDL060W TIR3P40552 269 aa3.47□□□□□ -1.85
TSR1YDL060W OKP1P53298 406 aa3.47□□□□□ -1.85
TSR1YDL060W CAF40P53829 373 aa3.47□□□□□ -1.85
TSR1YDL060W VAC7P53950 1165 aa3.47□□□□□ -1.85
TSR1YDL060W ECM11Q04110 302 aa3.47□□□□□ -1.85
TSR1YDL060W YMR310CQ04867 317 aaPredicted RBP3.47□□□□□ -1.85
TSR1YDL060W ECM7Q06200 448 aa3.47□□□□□ -1.85
TSR1YDL060W GIS3Q12418 502 aa3.47□□□□□ -1.85
TSR1YDL060W YLR462WO13556 202 aa3.47□□□□□ -1.85
TSR1YDL060W RAD10P06838 210 aa3.47□□□□□ -1.85
TSR1YDL060W MAS1P10507 462 aa3.47□□□□□ -1.85
TSR1YDL060W SNF4P12904 322 aa3.47□□□□□ -1.85
TSR1YDL060W COQ1P18900 473 aa3.47□□□□□ -1.85
TSR1YDL060W ISY1P21374 235 aaPredicted RBP3.47□□□□□ -1.85
TSR1YDL060W YPS1P32329 569 aa3.47□□□□□ -1.85
TSR1YDL060W SUA5P32579 426 aa3.47□□□□□ -1.85
TSR1YDL060W RAD23P32628 398 aaKnown RBP3.47□□□□□ -1.85
TSR1YDL060W VPS51P36116 164 aa3.47□□□□□ -1.85
TSR1YDL060W YBR137WP38276 179 aa3.47□□□□□ -1.85
TSR1YDL060W YHL049CP38722 271 aa3.47□□□□□ -1.85
TSR1YDL060W YEL075CP39972 122 aa3.47□□□□□ -1.85
TSR1YDL060W YER189WP40104 122 aa3.47□□□□□ -1.85
TSR1YDL060W GAT2P40209 560 aa3.47□□□□□ -1.85
TSR1YDL060W YFL064CP43540 174 aa3.47□□□□□ -1.85
TSR1YDL060W TOS3P43637 560 aa3.47□□□□□ -1.85
TSR1YDL060W YNL146WP53906 100 aa3.47□□□□□ -1.85
TSR1YDL060W GRX5Q02784 150 aa3.47□□□□□ -1.85
TSR1YDL060W NNT1Q05874 261 aa3.47□□□□□ -1.85
TSR1YDL060W PEX27Q08580 376 aa3.47□□□□□ -1.85
TSR1YDL060W SAM4Q08985 325 aaKnown RBP3.47□□□□□ -1.85
TSR1YDL060W MED4Q12343 284 aa3.47□□□□□ -1.85
TSR1YDL060W SPO24Q3E752 67 aa3.47□□□□□ -1.85
TSR1YDL060W RIM15P43565 1770 aa3.46□□□□□ -1.86
TSR1YDL060W TEF1P02994 458 aaKnown RBP3.46□□□□□ -1.86
TSR1YDL060W NMT1P14743 455 aa3.46□□□□□ -1.86
TSR1YDL060W RPS5P26783 225 aaKnown RBP3.46□□□□□ -1.86
TSR1YDL060W ASF2P32448 525 aaPredicted RBP3.46□□□□□ -1.86
TSR1YDL060W KRE6P32486 720 aa3.46□□□□□ -1.86
TSR1YDL060W NUP2P32499 720 aa3.46□□□□□ -1.86
TSR1YDL060W SPR1P32603 445 aa3.46□□□□□ -1.86
TSR1YDL060W FRE1P32791 686 aa3.46□□□□□ -1.86
TSR1YDL060W MIA40P36046 403 aa3.46□□□□□ -1.86
TSR1YDL060W RCK2P38623 610 aa3.46□□□□□ -1.86
TSR1YDL060W STP2P38704 541 aa3.46□□□□□ -1.86
TSR1YDL060W YAT2P40017 923 aa3.46□□□□□ -1.86
TSR1YDL060W YJL070CP40361 888 aa3.46□□□□□ -1.86
TSR1YDL060W PHB1P40961 287 aa3.46□□□□□ -1.86
TSR1YDL060W PET117Q02771 107 aa3.46□□□□□ -1.86
TSR1YDL060W URC2Q04411 772 aa3.46□□□□□ -1.86
TSR1YDL060W APC4Q04601 652 aa3.46□□□□□ -1.86
TSR1YDL060W MRPL35Q06678 367 aa3.46□□□□□ -1.86
TSR1YDL060W DIB1Q06819 143 aaPredicted RBP3.46□□□□□ -1.86
TSR1YDL060W SNX3Q08826 162 aaKnown RBP3.46□□□□□ -1.86
TSR1YDL060W YLR053CQ12026 108 aa3.46□□□□□ -1.86
TSR1YDL060W SLM3Q12093 417 aa3.46□□□□□ -1.86
TSR1YDL060W RDL1Q12305 139 aaKnown RBP3.46□□□□□ -1.86
TSR1YDL060W RMD5Q12508 421 aa3.46□□□□□ -1.86
TSR1YDL060W YER145C-AA0A023PYF4 145 aa3.46□□□□□ -1.86
TSR1YDL060W CBP6P07253 162 aaPredicted RBP3.46□□□□□ -1.86
TSR1YDL060W SAR1P20606 190 aaKnown RBP3.46□□□□□ -1.86
TSR1YDL060W YUR1P26725 428 aa3.46□□□□□ -1.86
TSR1YDL060W TFC1P32367 649 aa3.46□□□□□ -1.86
TSR1YDL060W CYS4P32582 507 aaKnown RBP3.46□□□□□ -1.86
TSR1YDL060W MUD1P32605 298 aaKnown RBP3.46□□□□□ -1.86
TSR1YDL060W PAD1P33751 242 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
TSR1YDL060W BNA4P38169 460 aa3.46□□□□□ -1.86
TSR1YDL060W TAE1P38340 232 aa3.46□□□□□ -1.86
TSR1YDL060W PAC11P40960 533 aa3.46□□□□□ -1.86
TSR1YDL060W MSS2P40990 351 aa3.46□□□□□ -1.86
TSR1YDL060W PHO86P46956 311 aa3.46□□□□□ -1.86
TSR1YDL060W PYK2P52489 506 aaKnown RBP3.46□□□□□ -1.86
TSR1YDL060W MPS1P54199 764 aa3.46□□□□□ -1.86
TSR1YDL060W DID2P69771 204 aa3.46□□□□□ -1.86
TSR1YDL060W PDR8Q06149 701 aa3.46□□□□□ -1.86
TSR1YDL060W BSP1Q06604 576 aa3.46□□□□□ -1.86
TSR1YDL060W RAD34Q06665 692 aa3.46□□□□□ -1.86
TSR1YDL060W APC9Q12107 265 aa3.46□□□□□ -1.86
TSR1YDL060W RGT2Q12300 763 aa3.46□□□□□ -1.86
TSR1YDL060W DGK1Q12382 290 aa3.46□□□□□ -1.86
TSR1YDL060W PAA1Q12447 191 aaKnown RBP3.46□□□□□ -1.86
TSR1YDL060W YPT1P01123 206 aaKnown RBP3.45□□□□□ -1.86
TSR1YDL060W RPL22AP05749 121 aaKnown RBP3.45□□□□□ -1.86
TSR1YDL060W RAD52P06778 471 aaKnown RBP3.45□□□□□ -1.86
TSR1YDL060W MRP2P10663 115 aaPredicted RBP3.45□□□□□ -1.86
TSR1YDL060W UTR4P32626 227 aa3.45□□□□□ -1.86
TSR1YDL060W MGM101P32787 269 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 77.6 ms