RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 PTPN14Q15678 1187 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 STPG1Q5TH74 334 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 KIAA1211LQ6NV74 962 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 LYPD4Q6UWN0 246 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 CCDC149Q6ZUS6 474 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 KCTD1Q719H9 257 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 SV2AQ7L0J3 742 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 NPAS4Q8IUM7 802 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 CLEC4DQ8WXI8 215 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 MRPS27Q92552 414 aaKnown RBP8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 MEIS3Q99687 375 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 C16orf70Q9BSU1 422 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 LSM14BQ9BX40 385 aaKnown RBP8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 AGO3Q9H9G7 860 aaKnown RBP8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 SETD4Q9NVD3 440 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 PRR12Q9ULL5 1215 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 TICRRQ7Z2Z1 1910 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 TEX15Q9BXT5 2789 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 ZNF532Q9HCE3 1301 aa8.13□□□□□ -1.11
SCAMP1-206ENST00000618166 LOC102724159A0A0B4J2E5 919 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 C2orf71A6NGG8 1288 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 IGSF3O75054 1194 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 CAND2O75155 1236 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 F12P00748 615 aaPredicted RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 CD52P31358 61 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 MGAT3Q09327 533 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 C19orf57Q0VDD7 668 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 SNW1Q13573 536 aaKnown RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 UBXN2BQ14CS0 331 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 PWP2Q15269 919 aaKnown RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 RUFY4Q6ZNE9 571 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 TMC7Q7Z402 723 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 BPHLQ86WA6 291 aaPredicted RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 RPAP2Q8IXW5 612 aaPredicted RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 GMCL1P1Q8NEA9 526 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 PPTC7Q8NI37 304 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 STAG1Q8WVM7 1258 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 PIK3R5Q8WYR1 880 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 CEP95Q96GE4 821 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 ZNF512BQ96KM6 892 aaPredicted RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 MYL10Q9BUA6 226 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 SMOC1Q9H4F8 434 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 PRMT8Q9NR22 394 aaPredicted RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 TYW1Q9NV66 732 aaKnown RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 DBNLQ9UJU6 430 aaKnown RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 DDX41Q9UJV9 622 aaKnown RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 PTPRCP08575 1304 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 FRMPD2Q68DX3 1309 aaPredicted RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 MYH7BA7E2Y1 1941 aa8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 BAZ2AQ9UIF9 1905 aaKnown RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 ANKRD17O75179 2603 aaKnown RBP8.12□□□□□ -1.11
SCAMP1-206ENST00000618166 TCRBV5S4A2TA0A5A2 114 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 KANSL1LA0AUZ9 987 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 FAM170BA6NMN3 283 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 TBKBP1A7MCY6 615 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 CHGBP05060 677 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 ICAM1P05362 532 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 MCCP23508 829 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 CA8P35219 290 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 RPS6P62753 249 aaKnown RBP8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 AGERQ15109 404 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 HSDL1Q3SXM5 330 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 FAM102BQ5T8I3 360 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 SLC9C2Q5TAH2 1124 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 CTR9Q6PD62 1173 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 RNF207Q6ZRF8 634 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 PROSER1Q86XN7 944 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 MRPL43Q8N983 215 aaKnown RBP8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 AUTS2Q8WXX7 1259 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 MYADMQ96S97 322 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 GPR20Q99678 358 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 C1QTNF2Q9BXJ5 285 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 CCDC8Q9H0W5 538 aaPredicted RBP8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 CWH43Q9H720 699 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 NGRNQ9NPE2 291 aaKnown RBP8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 KLK13Q9UKR3 277 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 MAP4K5Q9Y4K4 846 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 ZNF462Q96JM2 2506 aa8.11□□□□□ -1.11
SCAMP1-206ENST00000618166 COL12A1Q99715 3063 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 ARHGAP6O43182 974 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 SPINT1O43278 529 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 HYAL3O43820 417 aaPredicted RBP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 MBD4O95243 580 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 CAPNS1P04632 268 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 SCG2P13521 617 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 FSHRP23945 695 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 GBP2P32456 591 aaPredicted RBP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 PLCB3Q01970 1234 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 TROAPQ12815 778 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 MTAPQ13126 283 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 LETM2Q2VYF4 491 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 FBXO47Q5MNV8 452 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 GPR149Q86SP6 731 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 FAM160B2Q86V87 743 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 CELF5Q8N6W0 485 aaKnown RBP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 CHURC1Q8WUH1 139 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 HNRNPLLQ8WVV9 542 aaKnown RBP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 MKL1Q969V6 931 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 LRIG1Q96JA1 1093 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms