RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 CMA1P23946 247 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 PTGISQ16647 500 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 XKR9Q5GH70 373 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 CDK5RAP3Q96JB5 506 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 CEP170P1Q96L14 293 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 BLOC1S4Q9NUP1 217 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 TUBE1Q9UJT0 475 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 PPME1Q9Y570 386 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 KLRC1P26715 233 aa20.99■□□□□ 0.95
CCDC9-205ENST00000600117 NAALADL2Q58DX5 795 aa20.99■□□□□ 0.95
CCDC9-205ENST00000600117 MTHFD1LQ6UB35 978 aa20.99■□□□□ 0.95
CCDC9-205ENST00000600117 SERINC5Q86VE9 423 aa20.99■□□□□ 0.95
CCDC9-205ENST00000600117 LINC01465Q8N7H1 131 aa20.99■□□□□ 0.95
CCDC9-205ENST00000600117 CCDC39Q9UFE4 941 aa20.99■□□□□ 0.95
CCDC9-205ENST00000600117 DNM3Q9UQ16 869 aa20.99■□□□□ 0.95
CCDC9-205ENST00000600117 HPSEQ9Y251 543 aa20.99■□□□□ 0.95
CCDC9-205ENST00000600117 LOXHD1Q8IVV2 1947 aa20.99■□□□□ 0.95
CCDC9-205ENST00000600117 TFF2Q03403 129 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 E2F4Q16254 413 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 CSPP1Q1MSJ5 1256 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 RUFY4Q6ZNE9 571 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 RASSF8Q8NHQ8 419 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 DHX38Q92620 1227 aaKnown RBP20.98■□□□□ 0.95
CCDC9-205ENST00000600117 WNT8BQ93098 351 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 PANK2Q9BZ23 570 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 BHMT2Q9H2M3 363 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 GOLPH3LQ9H4A5 285 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 DHX33Q9H6R0 707 aaKnown RBP20.98■□□□□ 0.95
CCDC9-205ENST00000600117 FAM13BQ9NYF5 915 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 HCN4Q9Y3Q4 1203 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 PCDHA2Q9Y5H9 948 aa20.98■□□□□ 0.95
CCDC9-205ENST00000600117 IGKV6-21A0A0C4DH24 114 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 A0A1B0GVL5 298 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 MAGEB2O15479 319 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 MAFO75444 373 aaPredicted RBP20.97■□□□□ 0.95
CCDC9-205ENST00000600117 CYP2C9P11712 490 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 PFKFB1P16118 471 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 TBC1D8BQ0IIM8 1120 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 PTK7Q13308 1070 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 TRIM71Q2Q1W2 868 aaKnown RBP20.97■□□□□ 0.95
CCDC9-205ENST00000600117 RRAGBQ5VZM2 374 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 PPP2R2DQ66LE6 453 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 CCDC73Q6ZRK6 1079 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 OTOP2Q7RTS6 562 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 MICALL1Q8N3F8 863 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 PDILTQ8N807 584 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 FSIP1Q8NA03 581 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 RAD54LQ92698 747 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 HIPK3Q9H422 1215 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 XPNPEP1Q9NQW7 623 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 STK17AQ9UEE5 414 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 EVPLQ92817 2033 aa20.97■□□□□ 0.95
CCDC9-205ENST00000600117 SMIM35A0A1B0GVV1 85 aa20.96■□□□□ 0.95
CCDC9-205ENST00000600117 ARHGEF35A5YM69 484 aa20.96■□□□□ 0.95
CCDC9-205ENST00000600117 GADD45BO75293 160 aaPredicted RBP20.96■□□□□ 0.95
CCDC9-205ENST00000600117 PLA2G4BP0C869 781 aa20.96■□□□□ 0.95
CCDC9-205ENST00000600117 RFC5P40937 340 aa20.96■□□□□ 0.95
CCDC9-205ENST00000600117 SLC12A3P55017 1021 aa20.96■□□□□ 0.95
CCDC9-205ENST00000600117 SYT2Q8N9I0 419 aaPredicted RBP20.96■□□□□ 0.95
CCDC9-205ENST00000600117 MRPS27Q92552 414 aaKnown RBP20.96■□□□□ 0.95
CCDC9-205ENST00000600117 LRFN3Q9BTN0 628 aa20.96■□□□□ 0.95
CCDC9-205ENST00000600117 KCNH3Q9ULD8 1083 aa20.96■□□□□ 0.95
CCDC9-205ENST00000600117 PCDHA11Q9Y5I1 949 aa20.96■□□□□ 0.95
CCDC9-205ENST00000600117 BRWD1Q9NSI6 2320 aa20.96■□□□□ 0.95
CCDC9-205ENST00000600117 USO1O60763 962 aaKnown RBP20.95■□□□□ 0.94
CCDC9-205ENST00000600117 DGAT1O75907 488 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 STAT6P42226 847 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 KCNQ1P51787 676 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 NDUFA8P51970 172 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 RABGGTBP53611 331 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 RBL2Q08999 1139 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 MKRN4PQ13434 485 aaPredicted RBP20.95■□□□□ 0.94
CCDC9-205ENST00000600117 MCM6Q14566 821 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 TPRNQ4KMQ1 711 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 TAF2Q6P1X5 1199 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 PADI6Q6TGC4 694 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 LARP4BQ92615 738 aaKnown RBP20.95■□□□□ 0.94
CCDC9-205ENST00000600117 CCDC43Q96MW1 224 aaKnown RBP20.95■□□□□ 0.94
CCDC9-205ENST00000600117 GBP4Q96PP9 640 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 NOD1Q9Y239 953 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 SLC4A7Q9Y6M7 1214 aa20.95■□□□□ 0.94
CCDC9-205ENST00000600117 POLR2DO15514 142 aaKnown RBP20.94■□□□□ 0.94
CCDC9-205ENST00000600117 POU3F3P20264 500 aaPredicted RBP20.94■□□□□ 0.94
CCDC9-205ENST00000600117 CLCN3P51790 818 aa20.94■□□□□ 0.94
CCDC9-205ENST00000600117 POLGP54098 1239 aaPredicted RBP20.94■□□□□ 0.94
CCDC9-205ENST00000600117 DRP2Q13474 957 aa20.94■□□□□ 0.94
CCDC9-205ENST00000600117 EMC2Q15006 297 aa20.94■□□□□ 0.94
CCDC9-205ENST00000600117 RINT1Q6NUQ1 792 aa20.94■□□□□ 0.94
CCDC9-205ENST00000600117 EFCAB12Q6NXP0 572 aa20.94■□□□□ 0.94
CCDC9-205ENST00000600117 RPAINQ86UA6 219 aa20.94■□□□□ 0.94
CCDC9-205ENST00000600117 KIAA0319LQ8IZA0 1049 aa20.94■□□□□ 0.94
CCDC9-205ENST00000600117 LRRC71Q8N4P6 559 aa20.94■□□□□ 0.94
CCDC9-205ENST00000600117 DHX58Q96C10 678 aa20.94■□□□□ 0.94
CCDC9-205ENST00000600117 RUSC1Q9BVN2 902 aa20.94■□□□□ 0.94
CCDC9-205ENST00000600117 BMP2KQ9NSY1 1161 aaPredicted RBP20.94■□□□□ 0.94
CCDC9-205ENST00000600117 UMODL1Q5DID0 1318 aa20.94■□□□□ 0.94
CCDC9-205ENST00000600117 GOLGA6L4A6NEF3 574 aa20.93■□□□□ 0.94
CCDC9-205ENST00000600117 CYP11B2P19099 503 aa20.93■□□□□ 0.94
CCDC9-205ENST00000600117 SKIV2LQ15477 1246 aaKnown RBP20.93■□□□□ 0.94
CCDC9-205ENST00000600117 C1orf186Q6ZWK4 172 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms