RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 FGFR4P22455 802 aa22.47■■□□□ 1.19
SS18-218ENST00000581021 RFC5P40937 340 aa22.47■■□□□ 1.19
SS18-218ENST00000581021 RARRES1P49788 294 aa22.47■■□□□ 1.19
SS18-218ENST00000581021 POLGP54098 1239 aaPredicted RBP22.47■■□□□ 1.19
SS18-218ENST00000581021 SP7Q8TDD2 431 aaPredicted RBP22.47■■□□□ 1.19
SS18-218ENST00000581021 RC3H2Q9HBD1 1191 aaKnown RBP22.47■■□□□ 1.19
SS18-218ENST00000581021 TUFT1Q9NNX1 390 aa22.47■■□□□ 1.19
SS18-218ENST00000581021 ANKEF1Q9NU02 776 aa22.47■■□□□ 1.19
SS18-218ENST00000581021 STXBP5LQ9Y2K9 1186 aa22.47■■□□□ 1.19
SS18-218ENST00000581021 LINC01553A4QN01 128 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 EIF4BP23588 611 aaKnown RBP22.46■■□□□ 1.19
SS18-218ENST00000581021 RPA1P27694 616 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 PRPHP41219 470 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 RESTQ13127 1097 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 ADGRE1Q14246 886 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 DSC3Q14574 896 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 OTUD6AQ7L8S5 288 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 RHPN2Q8IUC4 686 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 NLRP7Q8WX94 980 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 SLC7A3Q8WY07 619 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 MTMR6Q9Y217 621 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 PPME1Q9Y570 386 aa22.46■■□□□ 1.19
SS18-218ENST00000581021 A0A087WZ62 844 aa22.45■■□□□ 1.18
SS18-218ENST00000581021 PDCP20941 246 aa22.45■■□□□ 1.18
SS18-218ENST00000581021 CDC25AP30304 524 aa22.45■■□□□ 1.18
SS18-218ENST00000581021 BRAPQ7Z569 592 aa22.45■■□□□ 1.18
SS18-218ENST00000581021 PRPF31Q8WWY3 499 aaKnown RBP22.45■■□□□ 1.18
SS18-218ENST00000581021 FDXACB1Q9BRP7 624 aaPredicted RBP22.45■■□□□ 1.18
SS18-218ENST00000581021 MMTAG2Q9BU76 263 aaKnown RBP22.45■■□□□ 1.18
SS18-218ENST00000581021 FTHL17Q9BXU8 183 aa22.45■■□□□ 1.18
SS18-218ENST00000581021 LRWD1Q9UFC0 647 aa22.45■■□□□ 1.18
SS18-218ENST00000581021 RFXAPO00287 272 aa22.44■■□□□ 1.18
SS18-218ENST00000581021 LAD1O00515 517 aa22.44■■□□□ 1.18
SS18-218ENST00000581021 DNM2P50570 870 aa22.44■■□□□ 1.18
SS18-218ENST00000581021 FAM173BQ6P4H8 233 aa22.44■■□□□ 1.18
SS18-218ENST00000581021 HSCBQ8IWL3 235 aa22.44■■□□□ 1.18
SS18-218ENST00000581021 NLRP4Q96MN2 994 aa22.44■■□□□ 1.18
SS18-218ENST00000581021 SCLT1Q96NL6 688 aa22.44■■□□□ 1.18
SS18-218ENST00000581021 ADAM2Q99965 735 aa22.44■■□□□ 1.18
SS18-218ENST00000581021 JPH2Q9BR39 696 aaPredicted RBP22.44■■□□□ 1.18
SS18-218ENST00000581021 IFT122Q9HBG6 1241 aa22.44■■□□□ 1.18
SS18-218ENST00000581021 INSL6Q9Y581 213 aa22.44■■□□□ 1.18
SS18-218ENST00000581021 COL4A3BPQ9Y5P4 624 aa22.44■■□□□ 1.18
SS18-218ENST00000581021 GPR182O15218 404 aa22.43■■□□□ 1.18
SS18-218ENST00000581021 CCT6AP40227 531 aaKnown RBP22.43■■□□□ 1.18
SS18-218ENST00000581021 GATMP50440 423 aa22.43■■□□□ 1.18
SS18-218ENST00000581021 LAMTOR4Q0VGL1 99 aa22.43■■□□□ 1.18
SS18-218ENST00000581021 PDIA5Q14554 519 aa22.43■■□□□ 1.18
SS18-218ENST00000581021 ZNF710Q8N1W2 664 aa22.43■■□□□ 1.18
SS18-218ENST00000581021 ERMNQ8TAM6 284 aa22.43■■□□□ 1.18
SS18-218ENST00000581021 ASAP3Q8TDY4 903 aa22.43■■□□□ 1.18
SS18-218ENST00000581021 YME1L1Q96TA2 773 aa22.43■■□□□ 1.18
SS18-218ENST00000581021 MTRQ99707 1265 aa22.43■■□□□ 1.18
SS18-218ENST00000581021 MYO9BQ13459 2157 aa22.43■■□□□ 1.18
SS18-218ENST00000581021 PRUNE2Q8WUY3 3088 aa22.43■■□□□ 1.18
SS18-218ENST00000581021 COL4A4P53420 1690 aaPredicted RBP22.42■■□□□ 1.18
SS18-218ENST00000581021 C9IYK1 514 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 USO1O60763 962 aaKnown RBP22.42■■□□□ 1.18
SS18-218ENST00000581021 LINC00271P0C7V0 271 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 FOSL2P15408 326 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 DTHD1Q6ZMT9 781 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 ZNF410Q86VK4 478 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 SNX29Q8TEQ0 813 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 PSPC1Q8WXF1 523 aaKnown RBP22.42■■□□□ 1.18
SS18-218ENST00000581021 ARNTL2Q8WYA1 636 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 MINDY3Q9H8M7 445 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 ATP6V0A4Q9HBG4 840 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 GPRC5CQ9NQ84 441 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 RGS18Q9NS28 235 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 DBR1Q9UK59 544 aaKnown RBP22.42■■□□□ 1.18
SS18-218ENST00000581021 MTUS1Q9ULD2 1270 aa22.42■■□□□ 1.18
SS18-218ENST00000581021 DGAT1O75907 488 aa22.41■■□□□ 1.18
SS18-218ENST00000581021 DGKIO75912 1065 aa22.41■■□□□ 1.18
SS18-218ENST00000581021 XRCC6P12956 609 aaKnown RBP eCLIP22.41■■□□□ 1.18
SS18-218ENST00000581021 GRIN1Q05586 938 aa22.41■■□□□ 1.18
SS18-218ENST00000581021 HAUS3Q68CZ6 603 aa22.41■■□□□ 1.18
SS18-218ENST00000581021 NPAS4Q8IUM7 802 aa22.41■■□□□ 1.18
SS18-218ENST00000581021 ZNF689Q96CS4 500 aaPredicted RBP22.41■■□□□ 1.18
SS18-218ENST00000581021 NACC1Q96RE7 527 aa22.41■■□□□ 1.18
SS18-218ENST00000581021 C17orf80Q9BSJ5 609 aa22.41■■□□□ 1.18
SS18-218ENST00000581021 GCOM2Q9BZD3 368 aaPredicted RBP22.41■■□□□ 1.18
SS18-218ENST00000581021 REV3LO60673 3130 aa22.4■■□□□ 1.18
SS18-218ENST00000581021 VWA3AA6NCI4 1184 aa22.4■■□□□ 1.18
SS18-218ENST00000581021 STX6O43752 255 aa22.4■■□□□ 1.18
SS18-218ENST00000581021 GAS2O43903 313 aaKnown RBP22.4■■□□□ 1.18
SS18-218ENST00000581021 LPXNO60711 386 aa22.4■■□□□ 1.18
SS18-218ENST00000581021 SRGAP2CP0DJJ0 459 aa22.4■■□□□ 1.18
SS18-218ENST00000581021 IBSPP21815 317 aaPredicted RBP22.4■■□□□ 1.18
SS18-218ENST00000581021 ARL2P36404 184 aa22.4■■□□□ 1.18
SS18-218ENST00000581021 SARSP49591 514 aaKnown RBP22.4■■□□□ 1.18
SS18-218ENST00000581021 ERVK-21P61565 698 aa22.4■■□□□ 1.18
SS18-218ENST00000581021 KCNK18Q7Z418 384 aa22.4■■□□□ 1.18
SS18-218ENST00000581021 DDX19AQ9NUU7 478 aaKnown RBP22.4■■□□□ 1.18
SS18-218ENST00000581021 KIAA1024Q9UPX6 916 aa22.4■■□□□ 1.18
SS18-218ENST00000581021 CLIC4Q9Y696 253 aa22.4■■□□□ 1.18
SS18-218ENST00000581021 ADGRA3Q8IWK6 1321 aa22.39■■□□□ 1.18
SS18-218ENST00000581021 DENND3A2RUS2 1198 aa22.39■■□□□ 1.17
SS18-218ENST00000581021 GLRA2P23416 452 aa22.39■■□□□ 1.17
SS18-218ENST00000581021 FAM189BP81408 668 aa22.39■■□□□ 1.17
SS18-218ENST00000581021 CDC42EP1Q00587 391 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms