RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, human

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD3-205	ENST00000580980	CYP26B1	Q9NR63	512 aa		13.65	□□□□□ -0.22
PSMD3-205	ENST00000580980	PCDHA12	Q9UN75	941 aa		13.65	□□□□□ -0.22
PSMD3-205	ENST00000580980	TTC3	P53804	2025 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	MYO9B	Q13459	2157 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980		C9IYK1	514 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	MGEA5	O60502	916 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	NEMF	O60524	1076 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	DARS	P14868	501 aa	Known RBP	13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	ZSCAN20	P17040	1043 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	CTNNB1	P35222	781 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	RFC5	P40937	340 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	FOSB	P53539	338 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	ORC2	Q13416	577 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	DSC3	Q14574	896 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	NAALADL2	Q58DX5	795 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	NCAPH2	Q6IBW4	605 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	ZNF410	Q86VK4	478 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	NEK9	Q8TD19	979 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	SLC7A3	Q8WY07	619 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	MTMR9	Q96QG7	549 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	LXN	Q9BS40	222 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	INO80B	Q9C086	356 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	LMAN2L	Q9H0V9	348 aa		13.64	□□□□□ -0.23
PSMD3-205	ENST00000580980	TMEM150B	A6NC51	233 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	GAS2	O43903	313 aa	Known RBP	13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	LYPLA2	O95372	231 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	YWHAB	P31946	246 aa	Known RBP	13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	TIGD5	Q53EQ6	642 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	NLRP7	Q8WX94	980 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	P2RX5	Q93086	422 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	HLA-C	Q95604	372 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	DYDC2	Q96IM9	177 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	CEP170P1	Q96L14	293 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	SCLT1	Q96NL6	688 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	HSD17B14	Q9BPX1	270 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	DHX33	Q9H6R0	707 aa	Known RBP	13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	TTC12	Q9H892	705 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	TMEM161A	Q9NX61	479 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	UNC80	Q8N2C7	3258 aa		13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	COL4A4	P53420	1690 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD3-205	ENST00000580980	WDR81	Q562E7	1941 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	HOXA2	O43364	376 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	SLITRK3	O94933	977 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	TXK	P42681	527 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	TRAPPC10	P48553	1259 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	NPEPPS	P55786	919 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	GUCY1B3	Q02153	619 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	DRP2	Q13474	957 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	PLA2G4F	Q68DD2	849 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	TCP11	Q8WWU5	503 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	IPO9	Q96P70	1041 aa	Known RBP	13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	SH2D3A	Q9BRG2	576 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	ATP6V0A4	Q9HBG4	840 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	CHST12	Q9NRB3	414 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	RGL1	Q9NZL6	768 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	KIF3A	Q9Y496	699 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	MRPL42	Q9Y6G3	142 aa	Known RBP	13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	EVPL	Q92817	2033 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	PRUNE2	Q8WUY3	3088 aa		13.62	□□□□□ -0.23
PSMD3-205	ENST00000580980	RALGAPA2	Q2PPJ7	1873 aa		13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	WNT7A	O00755	349 aa		13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	XRCC6	P12956	609 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	SFPQ	P23246	707 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	POLG	P54098	1239 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	CTTN	Q14247	550 aa	Known RBP	13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	RHPN2	Q8IUC4	686 aa		13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	NOSTRIN	Q8IVI9	506 aa		13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	TPH2	Q8IWU9	490 aa		13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	TRAIP	Q9BWF2	469 aa		13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	DACT1	Q9NYF0	836 aa		13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	SMC3	Q9UQE7	1217 aa		13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980	TRANK1	O15050	2925 aa		13.61	□□□□□ -0.23
PSMD3-205	ENST00000580980		A0A087WZ62	844 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980		A0A0U1RQF3	1178 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	ASAP2	O43150	1006 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	NCK2	O43639	380 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	EOMES	O95936	686 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	HSP90AA1	P07900	732 aa	Known RBP	13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	PDIA4	P13667	645 aa	Known RBP	13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	ATP2B1	P20020	1258 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	MCM7	P33993	719 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	CYP4A11	Q02928	519 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	GNL2	Q13823	731 aa	Known RBP	13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	PAN2	Q504Q3	1202 aa	Known RBP	13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	XKR9	Q5GH70	373 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	ZNF579	Q8NAF0	562 aa	Known RBP	13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	PSPC1	Q8WXF1	523 aa	Known RBP	13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	RSPH1	Q8WYR4	309 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	ZNF668	Q96K58	619 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	TMEM117	Q9H0C3	514 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	TMEM60	Q9H2L4	133 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	NSUN3	Q9H649	340 aa	Known RBP	13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	AAAS	Q9NRG9	546 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	ANKEF1	Q9NU02	776 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	NOL7	Q9UMY1	257 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms