RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 SHDQ96IW2 340 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 SCNM1Q9BWG6 230 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 LSM14BQ9BX40 385 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 VN1R3Q9BXE9 311 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 ADAM33Q9BZ11 813 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 NAPBQ9H115 298 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 SMOC1Q9H4F8 434 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 PRMT8Q9NR22 394 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 TMEM161AQ9NX61 479 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 MRPL11Q9Y3B7 192 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 PCDHA1Q9Y5I3 950 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 DMXL2Q8TDJ6 3036 aa9.22□□□□□ -0.93
PPP4R1-211ENST00000578875 RALGAPA1Q6GYQ0 2036 aa9.21□□□□□ -0.93
PPP4R1-211ENST00000578875 AXIN1O15169 862 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 PPP1R11O60927 126 aaPredicted RBP9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 LRP3O75074 770 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 RPS6KA5O75582 802 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 CNPP09543 421 aaKnown RBP9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 CT47B1P0C2W7 299 aaPredicted RBP9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 CTSAP10619 480 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 RLBP1P12271 317 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 GNAT2P19087 354 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 PPM1AP35813 382 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 NEDD9Q14511 834 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 DSC3Q14574 896 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 AASDHQ4L235 1098 aaPredicted RBP9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 CLLU1OSQ5K130 101 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 ZBTB41Q5SVQ8 909 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 RNF169Q8NCN4 708 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 NXPE3Q969Y0 559 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 KIF1BPQ96EK5 621 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 KIF12Q96FN5 646 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 PCYT2Q99447 389 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 JMJD4Q9H9V9 463 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 TOMM22Q9NS69 142 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 C1orf112Q9NSG2 853 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 IRAK3Q9Y616 596 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 IGSF10Q6WRI0 2623 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 PATJQ8NI35 1801 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 ITPR1Q14643 2758 aa9.21□□□□□ -0.94
PPP4R1-211ENST00000578875 DOCK8Q8NF50 2099 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 BPTFQ12830 3046 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 M0QZ92 97 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 CCND2P30279 289 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 LIMK1P53667 647 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 PLCB4Q15147 1175 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 TSHZ3Q63HK5 1081 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 C15orf39Q6ZRI6 1047 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 KBTBD3Q8NAB2 608 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 HELQQ8TDG4 1101 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 ZNF707Q96C28 371 aaPredicted RBP9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 ZKSCAN3Q9BRR0 538 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 OSBPL6Q9BZF3 934 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 NACAP1Q9BZK3 213 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 MAF1Q9H063 256 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 ELAC1Q9H777 363 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 FAM217BQ9NTX9 383 aaPredicted RBP9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 ADAMTS20P59510 1910 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 CLUHO75153 1309 aa9.2□□□□□ -0.94
PPP4R1-211ENST00000578875 MIA3Q5JRA6 1907 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 ASXL3Q9C0F0 2248 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 TMEM8BA6NDV4 472 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 CHURC1-FNTBB4DL54 471 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 INPPL1O15357 1258 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 SMARCA5O60264 1052 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 LILRB3O75022 631 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 PRB1P04280 392 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 FGRP09769 529 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 FNTBP49356 437 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 ALDH7A1P49419 539 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 NOVA1P51513 510 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 LARP1BQ659C4 914 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 GET4Q7L5D6 327 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 DDX53Q86TM3 631 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 SIRT2Q8IXJ6 389 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 FAM160A2Q8N612 972 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 SMG7Q92540 1137 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 TMEM169Q96HH4 297 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 INPP4AQ96PE3 977 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 ARRDC1-AS1Q9H2J1 176 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 MAN1C1Q9NR34 630 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 PCDHA2Q9Y5H9 948 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 KDM3AQ9Y4C1 1321 aa9.19□□□□□ -0.94
PPP4R1-211ENST00000578875 ORC4O43929 436 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 DHX16O60231 1041 aaKnown RBP9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 NTHL1P78549 312 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 GHRHRQ02643 423 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 PRKCQQ04759 706 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 ADCY1Q08828 1119 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 LAMA4Q16363 1823 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 COL28A1Q2UY09 1125 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 LONRF3Q496Y0 759 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 HSP90AB4PQ58FF6 505 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 VPS53Q5VIR6 699 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 KIAA1211LQ6NV74 962 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 TPRG1Q6ZUI0 275 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 FAM228AQ86W67 206 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 ECHDC2Q86YB7 292 aa9.18□□□□□ -0.94
PPP4R1-211ENST00000578875 ITPRIPQ8IWB1 547 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms