RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 ME3Q16798 604 aa10.84□□□□□ -0.67
NPLOC4-216ENST00000574344 NCAPH2Q6IBW4 605 aa10.84□□□□□ -0.67
NPLOC4-216ENST00000574344 POTEDQ86YR6 584 aa10.84□□□□□ -0.67
NPLOC4-216ENST00000574344 RNF169Q8NCN4 708 aa10.84□□□□□ -0.67
NPLOC4-216ENST00000574344 PPP2R3CQ969Q6 453 aa10.84□□□□□ -0.67
NPLOC4-216ENST00000574344 MBOAT7Q96N66 472 aa10.84□□□□□ -0.67
NPLOC4-216ENST00000574344 ATP6V0A4Q9HBG4 840 aa10.84□□□□□ -0.67
NPLOC4-216ENST00000574344 RGS18Q9NS28 235 aa10.84□□□□□ -0.67
NPLOC4-216ENST00000574344 C9IYK1 514 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 H3BQ06 376 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 DKC1O60832 514 aaKnown RBP eCLIP10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 BAG4O95429 457 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 MMP1P03956 469 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 LINC00271P0C7V0 271 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 EIF4BP23588 611 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 PSMC5P62195 406 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 NR5A1Q13285 461 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 LEXMQ3ZCV2 418 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 FAM102BQ5T8I3 360 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 PLA2G4FQ68DD2 849 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 PPP4R3AQ6IN85 833 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 PTCRAQ6ISU1 281 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 FAM43BQ6ZT52 329 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 ABI1Q8IZP0 508 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 ZNF710Q8N1W2 664 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 LINC01465Q8N7H1 131 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 KLHL23Q8NBE8 558 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 NSUN7Q8NE18 718 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 P2RX5Q93086 422 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 PABPC5Q96DU9 382 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 FAM20AQ96MK3 541 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 GBP4Q96PP9 640 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 GCOM2Q9BZD3 368 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 IGFLR1Q9H665 355 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 AAASQ9NRG9 546 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 TMEM161AQ9NX61 479 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 PCDHB12Q9Y5F1 795 aa10.83□□□□□ -0.68
NPLOC4-216ENST00000574344 TDRD15B5MCY1 1934 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 FAM205CA6NFA0 338 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 EML1O00423 815 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 HOXA2O43364 376 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 JAK2O60674 1132 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 ITGB1P05556 798 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 FGFR1P11362 822 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 DARSP14868 501 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 FGFR4P22455 802 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 SFPQP23246 707 aaKnown RBP eCLIP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 SSTR3P32745 418 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 QARSP47897 775 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 POLGP54098 1239 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 PPP2R5CQ13362 524 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 DRP2Q13474 957 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 NAALADL2Q58DX5 795 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 EARS2Q5JPH6 523 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 B3GNT9Q6UX72 402 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 RHPN2Q8IUC4 686 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 SLFN12Q8IYM2 578 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 THNSL1Q8IYQ7 743 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 CRIPAKQ8N1N5 446 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 POF1BQ8WVV4 589 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 NLRP4Q96MN2 994 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 CCDC43Q96MW1 224 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 KIF2CQ99661 725 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 JPH2Q9BR39 696 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 LXNQ9BS40 222 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 NIFKQ9BYG3 293 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 ADAMTS10Q9H324 1103 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 KCNMB3Q9NPA1 279 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 VAV3Q9UKW4 847 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 PLAGL2Q9UPG8 496 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 FAM50BQ9Y247 325 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 C5orf42Q9H799 3197 aa10.82□□□□□ -0.68
NPLOC4-216ENST00000574344 A0A087WZ62 844 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 TBX3O15119 743 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 NCK2O43639 380 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 CSDE1O75534 798 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 P4HBP07237 508 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 FDPSP14324 419 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 IL9P15248 144 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 NDUFV1P49821 464 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 CDC42EP1Q00587 391 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 CYP4A11Q02928 519 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 HYAL1Q12794 435 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 DSC3Q14574 896 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 TARBP2Q15633 366 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 CLUL1Q15846 466 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 CALCRLQ16602 461 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 PUS10Q3MIT2 529 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 DIS3L2Q8IYB7 885 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 SPRYD3Q8NCJ5 442 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 SPPL3Q8TCT6 385 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 MICAL1Q8TDZ2 1067 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 CEP170P1Q96L14 293 aa10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 FDXACB1Q9BRP7 624 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 INO80BQ9C086 356 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-216ENST00000574344 TMEM117Q9H0C3 514 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms