RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 MCM6Q14566 821 aa12.42□□□□□ -0.42
ABR-208ENST00000570688 ZRSR1Q15695 479 aaKnown RBP12.42□□□□□ -0.42
ABR-208ENST00000570688 RINT1Q6NUQ1 792 aa12.42□□□□□ -0.42
ABR-208ENST00000570688 MAEAQ7L5Y9 396 aa12.42□□□□□ -0.42
ABR-208ENST00000570688 TMCO2Q7Z6W1 182 aaPredicted RBP12.42□□□□□ -0.42
ABR-208ENST00000570688 FAM228AQ86W67 206 aa12.42□□□□□ -0.42
ABR-208ENST00000570688 TMEM199Q8N511 208 aa12.42□□□□□ -0.42
ABR-208ENST00000570688 PRPF31Q8WWY3 499 aaKnown RBP12.42□□□□□ -0.42
ABR-208ENST00000570688 GOLPH3LQ9H4A5 285 aa12.42□□□□□ -0.42
ABR-208ENST00000570688 SUCLA2Q9P2R7 463 aaPredicted RBP12.42□□□□□ -0.42
ABR-208ENST00000570688 CIZ1Q9ULV3 898 aaPredicted RBP12.42□□□□□ -0.42
ABR-208ENST00000570688 TRPV2Q9Y5S1 764 aa12.42□□□□□ -0.42
ABR-208ENST00000570688 TTC3P53804 2025 aa12.42□□□□□ -0.42
ABR-208ENST00000570688 A0A087WZ62 844 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.41□□□□□ -0.42
ABR-208ENST00000570688 TTLL13PA6NNM8 815 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 SOX1O00570 391 aaPredicted RBP12.41□□□□□ -0.42
ABR-208ENST00000570688 DKC1O60832 514 aaKnown RBP eCLIP12.41□□□□□ -0.42
ABR-208ENST00000570688 CUTAO60888 179 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 CD52P31358 61 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 RFC5P40937 340 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 POLGP54098 1239 aaPredicted RBP12.41□□□□□ -0.42
ABR-208ENST00000570688 NUCB2P80303 420 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 CACNB1Q02641 598 aaPredicted RBP12.41□□□□□ -0.42
ABR-208ENST00000570688 LAMTOR4Q0VGL1 99 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 CAPSQ13938 189 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 RESP18Q5W5W9 173 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 ATL3Q6DD88 541 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.41□□□□□ -0.42
ABR-208ENST00000570688 OTUD6AQ7L8S5 288 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 OTOP2Q7RTS6 562 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 SYT2Q8N9I0 419 aaPredicted RBP12.41□□□□□ -0.42
ABR-208ENST00000570688 RETREG2Q8NC44 543 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 RAD54LQ92698 747 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 TNPO1Q92973 898 aaKnown RBP12.41□□□□□ -0.42
ABR-208ENST00000570688 IPO9Q96P70 1041 aaKnown RBP12.41□□□□□ -0.42
ABR-208ENST00000570688 FDXACB1Q9BRP7 624 aaPredicted RBP12.41□□□□□ -0.42
ABR-208ENST00000570688 RAB34Q9BZG1 259 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 UBE2OQ9C0C9 1292 aaKnown RBP12.41□□□□□ -0.42
ABR-208ENST00000570688 ERVK-5Q9HDB9 667 aa12.41□□□□□ -0.42
ABR-208ENST00000570688 GRXCR1A8MXD5 290 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 DGAT1O75907 488 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 PLA2G4BP0C869 781 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 UBA7P41226 1012 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 DEFB103AP81534 67 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 RAD51AP2Q09MP3 1159 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 PPIGQ13427 754 aaKnown RBP eCLIP12.4□□□□□ -0.42
ABR-208ENST00000570688 DSC3Q14574 896 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 RHPN2Q8IUC4 686 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 CRIPAKQ8N1N5 446 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 NME8Q8N427 588 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 CCDC155Q8N6L0 562 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 PDILTQ8N807 584 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 HERVK_113Q902F9 699 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 FIZ1Q96SL8 496 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 LBHD1Q9BQE6 289 aaPredicted RBP12.4□□□□□ -0.42
ABR-208ENST00000570688 POLR3FQ9H1D9 316 aaPredicted RBP12.4□□□□□ -0.42
ABR-208ENST00000570688 ATP6V0A4Q9HBG4 840 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 PADI3Q9ULW8 664 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 AKT3Q9Y243 479 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 GINS2Q9Y248 185 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 HPSEQ9Y251 543 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 USP20Q9Y2K6 914 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 PPME1Q9Y570 386 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 COL4A3BPQ9Y5P4 624 aa12.4□□□□□ -0.42
ABR-208ENST00000570688 FAM237AA0A1B0GTK4 181 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 ARHGEF35A5YM69 484 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 SFI1A8K8P3 1242 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 ARHGEF15O94989 841 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 DARSP14868 501 aaKnown RBP12.39□□□□□ -0.43
ABR-208ENST00000570688 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
ABR-208ENST00000570688 RFC2P35250 354 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 CRYBB1P53674 252 aaPredicted RBP12.39□□□□□ -0.43
ABR-208ENST00000570688 KRT85P78386 507 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 AMHR2Q16671 573 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 IER5Q5VY09 327 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 TSHZ1Q6ZSZ6 1077 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 TAS1R3Q7RTX0 852 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 KCNG4Q8TDN1 519 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 SLC7A3Q8WY07 619 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 STAMQ92783 540 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 DNAJC19Q96DA6 116 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 SPATA32Q96LK8 384 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 KIFC3Q9BVG8 833 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 CHMP5Q9NZZ3 219 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 CFAP45Q9UL16 551 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 DNM3Q9UQ16 869 aa12.39□□□□□ -0.43
ABR-208ENST00000570688 A0A1B0GVL5 298 aa12.38□□□□□ -0.43
ABR-208ENST00000570688 MYMKA6NI61 221 aa12.38□□□□□ -0.43
ABR-208ENST00000570688 SLC26A4O43511 780 aa12.38□□□□□ -0.43
ABR-208ENST00000570688 HIP1RO75146 1068 aa12.38□□□□□ -0.43
ABR-208ENST00000570688 GADD45BO75293 160 aaPredicted RBP12.38□□□□□ -0.43
ABR-208ENST00000570688 FGBP02675 491 aa12.38□□□□□ -0.43
ABR-208ENST00000570688 CASP1P29466 404 aa12.38□□□□□ -0.43
ABR-208ENST00000570688 ME1P48163 572 aa12.38□□□□□ -0.43
ABR-208ENST00000570688 PTENP60484 403 aa12.38□□□□□ -0.43
ABR-208ENST00000570688 WDR5P61964 334 aaKnown RBP12.38□□□□□ -0.43
ABR-208ENST00000570688 DHX8Q14562 1220 aaKnown RBP12.38□□□□□ -0.43
ABR-208ENST00000570688 CNKSR3Q6P9H4 555 aa12.38□□□□□ -0.43
ABR-208ENST00000570688 SPRED2Q7Z698 418 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms