RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 MRPS9P82933 396 aaKnown RBP6.19□□□□□ -1.42
LINC00560-201ENST00000564593 ADAM9Q13443 819 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 EFCAB2Q5VUJ9 269 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 DPP8Q6V1X1 898 aaPredicted RBP6.19□□□□□ -1.42
LINC00560-201ENST00000564593 MYPNQ86TC9 1320 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 STPG3Q8N7X2 389 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 KCNN1Q92952 543 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 RAX2Q96IS3 184 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 C11orf84Q9BUA3 381 aaPredicted RBP6.19□□□□□ -1.42
LINC00560-201ENST00000564593 RHOBTB2Q9BYZ6 727 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 GCM1Q9NP62 436 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 TMPRSS11EQ9UL52 423 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 NOB1Q9ULX3 412 aaKnown RBP6.19□□□□□ -1.42
LINC00560-201ENST00000564593 PFKMP08237 780 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 MTHFD2P13995 350 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 LIMS1P48059 325 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 MTNR1BP49286 362 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 IL13RA1P78552 427 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 LILRA6Q6PI73 481 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 MYO1HQ8N1T3 1032 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 TTLL6Q8N841 843 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 KYQ8NBH2 561 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 NOX5Q96PH1 765 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 WRNIP1Q96S55 665 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 KCTD10Q9H3F6 313 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 MTG2Q9H4K7 406 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 PRDM12Q9H4Q4 367 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 TCF7L1Q9HCS4 588 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 CROTQ9UKG9 612 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 DENND2AQ9ULE3 1009 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 ANKRD6Q9Y2G4 727 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 GPR45Q9Y5Y3 372 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 PRRG2O14669 202 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 RFPL1O75677 317 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 PF4V1P10720 104 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 OSMP13725 252 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 AGXTP21549 392 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 DLG4P78352 724 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 NFATC3Q12968 1075 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 SMAD4Q13485 552 aaKnown RBP6.18□□□□□ -1.42
LINC00560-201ENST00000564593 STILQ15468 1287 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 TMEM240Q5SV17 173 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 KCNK18Q7Z418 384 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 RSAD2Q8WXG1 361 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 AUTS2Q8WXX7 1259 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 SSH1Q8WYL5 1049 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 JADE3Q92613 823 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 ZBTB8AQ96BR9 441 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 CCDC136Q96JN2 1154 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 TEKT5Q96M29 485 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 SLC2A13Q96QE2 648 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 DPP7Q9UHL4 492 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 USP18Q9UMW8 372 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 GIT1Q9Y2X7 761 aa6.18□□□□□ -1.42
LINC00560-201ENST00000564593 CD83Q01151 205 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 TRIM25Q14258 630 aaKnown RBP6.17□□□□□ -1.42
LINC00560-201ENST00000564593 RTP5Q14D33 572 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 MUM1Q2TAK8 710 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 WDR72Q3MJ13 1102 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 FAM102BQ5T8I3 360 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 KANK2Q63ZY3 851 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 CXXC5Q7LFL8 322 aaKnown RBP6.17□□□□□ -1.42
LINC00560-201ENST00000564593 CMTR2Q8IYT2 770 aaKnown RBP6.17□□□□□ -1.42
LINC00560-201ENST00000564593 LINC00482Q8N8I6 264 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 HSPBAP1Q96EW2 488 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 TOX2Q96NM4 488 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 NOL10Q9BSC4 688 aaKnown RBP6.17□□□□□ -1.42
LINC00560-201ENST00000564593 ZNF277Q9NRM2 450 aaPredicted RBP6.17□□□□□ -1.42
LINC00560-201ENST00000564593 KCND1Q9NSA2 647 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 KCMF1Q9P0J7 381 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 FTSJ1Q9UET6 329 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 PRSS50Q9UI38 385 aa6.17□□□□□ -1.42
LINC00560-201ENST00000564593 OPHN1O60890 802 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 CYP7B1O75881 506 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 IL33O95760 270 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 SLC5A3P53794 718 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 HTRA3P83110 453 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 CDK17Q00537 523 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 PPARAQ07869 468 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 MAP3K12Q12852 859 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 SPIDRQ14159 915 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 LYSMD2Q8IV50 215 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 TPH2Q8IWU9 490 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 OR14C36Q8NHC7 312 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 C8orf48Q96LL4 319 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 PITHD1Q9GZP4 211 aaPredicted RBP6.16□□□□□ -1.42
LINC00560-201ENST00000564593 PCDHB6Q9Y5E3 794 aa6.16□□□□□ -1.42
LINC00560-201ENST00000564593 A0A0A6YYJ9 748 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 MLC1Q15049 377 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 NXNQ6DKJ4 435 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 GRAMD4Q6IC98 578 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 C14orf80Q86SX3 495 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 TCEAL8Q8IYN2 117 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 TMEFF1Q8IYR6 380 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 CDYL2Q8N8U2 506 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 GAB3Q8WWW8 586 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 HIST1H2AHQ96KK5 128 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 SIGLEC10Q96LC7 697 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 HIST1H2AJQ99878 128 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms