RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PSAPP07602 524 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 FAM102BQ5T8I3 360 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 FAM228AQ86W67 206 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 NPAS4Q8IUM7 802 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 SMAP1Q8IYB5 467 aaPredicted RBP17.58■□□□□ 0.4
USB1-208ENST00000563207 SLFN12Q8IYM2 578 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 NEK9Q8TD19 979 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 SLC5A5Q92911 643 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 TNPO1Q92973 898 aaKnown RBP17.58■□□□□ 0.4
USB1-208ENST00000563207 ADAM2Q99965 735 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 SH2D3AQ9BRG2 576 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 FTHL17Q9BXU8 183 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 NSUN3Q9H649 340 aaKnown RBP17.58■□□□□ 0.4
USB1-208ENST00000563207 DISC1Q9NRI5 854 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 MTMR6Q9Y217 621 aa17.58■□□□□ 0.4
USB1-208ENST00000563207 NEMFO60524 1076 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 ITGB1P05556 798 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 IRS1P35568 1242 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 HYAL1Q12794 435 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 TIGD5Q53EQ6 642 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 TTC38Q5R3I4 469 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 PTCRAQ6ISU1 281 aaPredicted RBP17.57■□□□□ 0.4
USB1-208ENST00000563207 ADGRD2Q7Z7M1 963 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 LINC01465Q8N7H1 131 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 ETNPPLQ8TBG4 499 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 KCNMB3Q9NPA1 279 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 CLDND1Q9NY35 253 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 PLAGL2Q9UPG8 496 aa17.57■□□□□ 0.4
USB1-208ENST00000563207 GRXCR2A6NFK2 248 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 SLC37A4O43826 429 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 GAS7O60861 476 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 PSMD10O75832 226 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 RPLP2P05387 115 aaKnown RBP17.56■□□□□ 0.4
USB1-208ENST00000563207 RB1P06400 928 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 NLRP11P59045 1033 aaKnown RBP17.56■□□□□ 0.4
USB1-208ENST00000563207 DRP2Q13474 957 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 COL19A1Q14993 1142 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 CLUL1Q15846 466 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 LRCH2Q5VUJ6 765 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 EFCAB12Q6NXP0 572 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 CMTR2Q8IYT2 770 aaKnown RBP17.56■□□□□ 0.4
USB1-208ENST00000563207 KLHL23Q8NBE8 558 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 SPRYD3Q8NCJ5 442 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 SPPL3Q8TCT6 385 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 C11orf84Q9BUA3 381 aaPredicted RBP17.56■□□□□ 0.4
USB1-208ENST00000563207 IGFLR1Q9H665 355 aa17.56■□□□□ 0.4
USB1-208ENST00000563207 DAXXQ9UER7 740 aaPredicted RBP17.56■□□□□ 0.4
USB1-208ENST00000563207 WDR64B1ANS9 1081 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 C9IYK1 514 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 LAD1O00515 517 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 MARCH6O60337 910 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 CSDE1O75534 798 aaKnown RBP17.55■□□□□ 0.4
USB1-208ENST00000563207 STBD1O95210 358 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 OATP04181 439 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 FGFR1P11362 822 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 FGFR4P22455 802 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 SARSP49591 514 aaKnown RBP17.55■□□□□ 0.4
USB1-208ENST00000563207 CRYBB1P53674 252 aaPredicted RBP17.55■□□□□ 0.4
USB1-208ENST00000563207 PRKCEQ02156 737 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 DSC3Q14574 896 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 CALCRLQ16602 461 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 FAM178BQ8IXR5 827 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 RDM1Q8NG50 284 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 PABPC5Q96DU9 382 aaKnown RBP17.55■□□□□ 0.4
USB1-208ENST00000563207 TEKT3Q9BXF9 490 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 ADAMTS10Q9H324 1103 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 C11orf16Q9NQ32 467 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 RGS18Q9NS28 235 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 LRFN2Q9ULH4 789 aa17.55■□□□□ 0.4
USB1-208ENST00000563207 FAM86C2PA6NEL3 165 aa17.54■□□□□ 0.4
USB1-208ENST00000563207 ATP2B1P20020 1258 aa17.54■□□□□ 0.4
USB1-208ENST00000563207 SFNP31947 248 aa17.54■□□□□ 0.4
USB1-208ENST00000563207 MCM7P33993 719 aa17.54■□□□□ 0.4
USB1-208ENST00000563207 TOB1P50616 345 aaPredicted RBP17.54■□□□□ 0.4
USB1-208ENST00000563207 CTC1Q2NKJ3 1217 aa17.54■□□□□ 0.4
USB1-208ENST00000563207 B3GNT9Q6UX72 402 aa17.54■□□□□ 0.4
USB1-208ENST00000563207 POTEDQ86YR6 584 aa17.54■□□□□ 0.4
USB1-208ENST00000563207 CEP89Q96ST8 783 aa17.54■□□□□ 0.4
USB1-208ENST00000563207 AKT3Q9Y243 479 aa17.54■□□□□ 0.4
USB1-208ENST00000563207 PCDHB7Q9Y5E2 793 aa17.54■□□□□ 0.4
USB1-208ENST00000563207 DENND3A2RUS2 1198 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 TBKBP1A7MCY6 615 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 EML1O00423 815 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 TBX10O75333 385 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 BMP15O95972 392 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 STAG3L1P0CL83 205 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 ZSCAN22P10073 491 aaPredicted RBP17.53■□□□□ 0.4
USB1-208ENST00000563207 RESTQ13127 1097 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 ZNF174Q15697 407 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 SLC24A5Q71RS6 500 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 FERMT3Q86UX7 667 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 HAS1Q92839 578 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 MTMR9Q96QG7 549 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.53■□□□□ 0.4
USB1-208ENST00000563207 RNF19AQ9NV58 838 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 PCDHA12Q9UN75 941 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 RWDD3Q9Y3V2 267 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 MYH15Q9Y2K3 1946 aa17.53■□□□□ 0.4
USB1-208ENST00000563207 WNT7AO00755 349 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 GPR182O15218 404 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms