RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 VRK3Q8IV63 474 aa4.8□□□□□ -1.64
HDGFL3-202ENST00000562702 ZNF669Q96BR6 464 aaPredicted RBP4.8□□□□□ -1.64
HDGFL3-202ENST00000562702 RPL10LQ96L21 214 aaKnown RBP4.8□□□□□ -1.64
HDGFL3-202ENST00000562702 IPO9Q96P70 1041 aaKnown RBP4.8□□□□□ -1.64
HDGFL3-202ENST00000562702 ARHGEF4Q9NR80 690 aa4.8□□□□□ -1.64
HDGFL3-202ENST00000562702 SIRPGQ9P1W8 387 aa4.8□□□□□ -1.64
HDGFL3-202ENST00000562702 SAE1Q9UBE0 346 aaPredicted RBP4.8□□□□□ -1.64
HDGFL3-202ENST00000562702 RCAN3Q9UKA8 241 aa4.8□□□□□ -1.64
HDGFL3-202ENST00000562702 ASB1Q9Y576 335 aa4.8□□□□□ -1.64
HDGFL3-202ENST00000562702 RECQL4O94761 1208 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 ERBB2P04626 1255 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 AMY2AP04746 511 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 MMEP08473 750 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 AMY2BP19961 511 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 JAM2P57087 298 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 BPIFB4P59827 614 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 GUCY1A3Q02108 690 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 RBL2Q08999 1139 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 SAFB2Q14151 953 aaKnown RBP eCLIP4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 EPHA10Q5JZY3 1008 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 FKBP15Q5T1M5 1219 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 LRRC55Q6ZSA7 311 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 ATXN2LQ8WWM7 1075 aaKnown RBP4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 PTPRN2Q92932 1015 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 GBP4Q96PP9 640 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 FAM193BQ96PV7 902 aaPredicted RBP4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 MNTQ99583 582 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 MSRB2Q9Y3D2 182 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 TRAF6Q9Y4K3 522 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 ASXL2Q76L83 1435 aa4.79□□□□□ -1.64
HDGFL3-202ENST00000562702 PRAMEF22A3QJZ6 481 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 ZNF561-AS1K7EIQ3 104 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 SRGAP2CP0DJJ0 459 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 STAT3P40763 770 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 KRTAP10-11P60412 298 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 GAGE13Q4V321 117 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 TIGD2Q4W5G0 525 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 HECTD2Q5U5R9 776 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 KRT40Q6A162 431 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 RHOUQ7L0Q8 258 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 GLCCI1Q86VQ1 547 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 ANKRD53Q8N9V6 530 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 PCDH19Q8TAB3 1148 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 NELL1Q92832 810 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 ARL8AQ96BM9 186 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 CCDC113Q9H0I3 377 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 IL23AQ9NPF7 189 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 KCNH7Q9NS40 1196 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 TRPS1Q9UHF7 1281 aa4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 RBM8AQ9Y5S9 174 aaKnown RBP4.78□□□□□ -1.64
HDGFL3-202ENST00000562702 UBE2QL1A1L167 161 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 CCDC85CA6NKD9 419 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 FOXP2O15409 715 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 PDPK1O15530 556 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 DNM2P50570 870 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 USP14P54578 494 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 TCIRG1Q13488 830 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 SERINC3Q13530 473 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 RASGRF1Q13972 1273 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 MTERF2Q49AM1 385 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 ZC3H7AQ8IWR0 971 aaKnown RBP4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 ASB15Q8WXK1 588 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 DRC1Q96MC2 740 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 BBC3Q96PG8 261 aaPredicted RBP4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 MLST8Q9BVC4 326 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 DENND2AQ9ULE3 1009 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 CBLCQ9ULV8 474 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 PCDHA8Q9Y5H6 950 aa4.77□□□□□ -1.65
HDGFL3-202ENST00000562702 CCDC66A2RUB6 948 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 KLRG2A4D1S0 409 aaPredicted RBP4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 KRTAP29-1A8MX34 341 aaPredicted RBP4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 SCDO00767 359 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 ZNF37AP17032 561 aaPredicted RBP4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 RABGGTBP53611 331 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 ERCC6LQ2NKX8 1250 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 OLFML1Q6UWY5 402 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 BHLHA9Q7RTU4 235 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 LRP10Q7Z4F1 713 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 MB21D1Q8N884 522 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 SUPT20HQ8NEM7 779 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 PMFBP1Q8TBY8 1022 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 UBXN4Q92575 508 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 E2F7Q96AV8 911 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 PGBD4Q96DM1 585 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 C16orf92Q96LL3 132 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 GPHA2Q96T91 129 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 CDC6Q99741 560 aa4.76□□□□□ -1.65
HDGFL3-202ENST00000562702 INO80B-WBP1J3KQ70 363 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 ARVCFO00192 962 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 KCNK3O14649 394 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 KIAA0355O15063 1070 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 HIP1RO75146 1068 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 GYPEP15421 78 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 ITGB6P18564 788 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 GNAT2P19087 354 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 LACTBP83111 547 aaPredicted RBP4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 PLEKHG4Q58EX7 1191 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 HTR3DQ70Z44 454 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 RD3Q7Z3Z2 195 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 HDGFL2Q7Z4V5 671 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms