RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 LTBP1Q14766 1721 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 A0A1W2PQJ5 194 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 ABLIM1O14639 778 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 PJA2O43164 708 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 LCA5LO95447 670 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 ECEL1O95672 775 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 MTIF2P46199 727 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 EN1Q05925 392 aaPredicted RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 MTA1Q13330 715 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 APLFQ8IW19 511 aaPredicted RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 CSGALNACT2Q8N6G5 542 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 EIF1ADQ8N9N8 165 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 PRMT1Q99873 361 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 NOC4LQ9BVI4 516 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 ARHGEF3Q9NR81 526 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 MTMR4Q9NYA4 1195 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 BIN2Q9UBW5 565 aaPredicted RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 NKX1-2Q9UD57 310 aaPredicted RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 SERPINB13Q9UIV8 391 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 SMCO2A6NFE2 343 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 RFC5P40937 340 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 IFNAR2P48551 515 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 SGSM1Q2NKQ1 1148 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 LETM2Q2VYF4 491 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 ZNF772Q68DY9 489 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 RBM12BQ8IXT5 1001 aaKnown RBP15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 SLC17A8Q8NDX2 589 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 TEKT1Q969V4 418 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 IFT74Q96LB3 600 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 FAM207AQ9NSI2 230 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 DLGAP2Q9P1A6 1054 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 F8VZ95 297 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 M0R2N6 131 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 EPHB6O15197 1021 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 SP100P23497 879 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 SLC16A2P36021 539 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 DHX9Q08211 1270 aaKnown RBP15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 CCDC178Q5BJE1 867 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 RNF10Q8N5U6 811 aaKnown RBP15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 C4orf32Q8N8J7 132 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 FBF1Q8TES7 1133 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 BICD1Q96G01 975 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 TMEM260Q9NX78 707 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 PCDHGA4Q9Y5G9 962 aa15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 COL11A2P13942 1736 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-203ENST00000562609 PSMA7O14818 248 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 RXRBP28702 533 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 TPP2P29144 1249 aaPredicted RBP15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 HNRNPH3P31942 346 aaKnown RBP15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 CRKP46108 304 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 GABPAQ06546 454 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 KLC1Q07866 573 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 BNIP1Q12981 228 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 GALNTL6Q49A17 601 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 TTBK2Q6IQ55 1244 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 TMC3Q7Z5M5 1100 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 LONP2Q86WA8 852 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 PBKQ96KB5 322 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 CNOT6LQ96LI5 555 aaKnown RBP15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 SUDS3Q9H7L9 328 aaPredicted RBP15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 INTS9Q9NV88 658 aaKnown RBP15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 PNMA3Q9UL41 463 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 MYH7BA7E2Y1 1941 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 LRRC37AA6NMS7 1700 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 H0YIN7 160 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 FLOT1O75955 427 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 GNAZP19086 355 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 ATP6V1C1P21283 382 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 AOC3Q16853 763 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 FIGNQ5HY92 759 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 TTI2Q6NXR4 508 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 UIMC1Q96RL1 719 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 NSRP1Q9H0G5 558 aaKnown RBP15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 PICK1Q9NRD5 415 aa15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 SEC63Q9UGP8 760 aaKnown RBP15.18■□□□□ 0.02
GTF3C1-203ENST00000562609 NKRFO15226 690 aaKnown RBP eCLIP15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 DAPK3O43293 454 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 BMP15O95972 392 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 GBP1P32455 592 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 RAD23BP54727 409 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 KCTD1Q719H9 257 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 MAIP1Q8WWC4 291 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 KIFAP3Q92845 792 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 SH3GLB2Q9NR46 395 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 BLOC1S6Q9UL45 172 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 SNX3O60493 162 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 CCNT1O60563 726 aaKnown RBP15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 SHMT1P34896 483 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 TRAPPC10P48553 1259 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 DYNC1I2Q13409 638 aaKnown RBP15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 MIIPQ5JXC2 388 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 RRAGAQ7L523 313 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 ERGIC2Q96RQ1 377 aa15.17■□□□□ 0.02
GTF3C1-203ENST00000562609 TLDC2A0PJX2 215 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 DDTLA6NHG4 134 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 LRRC53A6NM62 1247 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 HGSO14964 777 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 CREB3O43889 395 aa15.16■□□□□ 0.02
GTF3C1-203ENST00000562609 ECE2O60344 883 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms