RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 WEE2P0C1S8 567 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 GHRP10912 638 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 MTHFRP42898 656 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 RPS6P62753 249 aaKnown RBP6.24□□□□□ -1.41
HERC1-213ENST00000561359 UBE3AQ05086 875 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 ITIH3Q06033 890 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 TBC1D8BQ0IIM8 1120 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 TDGQ13569 410 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 LBRQ14739 615 aaKnown RBP6.24□□□□□ -1.41
HERC1-213ENST00000561359 PLPP4Q5VZY2 271 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 LYPD4Q6UWN0 246 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 TMEM184AQ6ZMB5 413 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 C1orf210Q8IVY1 113 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 CMTR2Q8IYT2 770 aaKnown RBP6.24□□□□□ -1.41
HERC1-213ENST00000561359 ZDHHC14Q8IZN3 488 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 TPCN2Q8NHX9 752 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 PPTC7Q8NI37 304 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 CALR3Q96L12 384 aaKnown RBP6.24□□□□□ -1.41
HERC1-213ENST00000561359 UCN2Q96RP3 112 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 ADAM7Q9H2U9 754 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 CYP26B1Q9NR63 512 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 ZNF358Q9NW07 568 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 ARPP21Q9UBL0 812 aaPredicted RBP6.24□□□□□ -1.41
HERC1-213ENST00000561359 DBR1Q9UK59 544 aaKnown RBP6.24□□□□□ -1.41
HERC1-213ENST00000561359 PCDHB12Q9Y5F1 795 aa6.24□□□□□ -1.41
HERC1-213ENST00000561359 NAV2Q8IVL1 2488 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 RNF225M0QZC1 329 aaPredicted RBP6.23□□□□□ -1.41
HERC1-213ENST00000561359 SORBS3O60504 671 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 BCAR3O75815 825 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 CELA2BP08218 269 aaPredicted RBP6.23□□□□□ -1.41
HERC1-213ENST00000561359 TSPY3P0CV98 308 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 TSPY8P0CW00 308 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 IBSPP21815 317 aaPredicted RBP6.23□□□□□ -1.41
HERC1-213ENST00000561359 ERVFC1P60507 584 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 LAMC2Q13753 1193 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 CCDC96Q2M329 555 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 RCSD1Q6JBY9 416 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 PDE12Q6L8Q7 609 aaKnown RBP6.23□□□□□ -1.41
HERC1-213ENST00000561359 RUFY4Q6ZNE9 571 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 AACSQ86V21 672 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 PLEKHM2Q8IWE5 1019 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 THNSL1Q8IYQ7 743 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 C1orf216Q8TAB5 229 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 RASGRP4Q8TDF6 673 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 ATRIPQ8WXE1 791 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 CASP10Q92851 521 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 ZNF287Q9HBT7 754 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 ENTPD7Q9NQZ7 604 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 DNAAF2Q9NVR5 837 aaKnown RBP6.23□□□□□ -1.41
HERC1-213ENST00000561359 TMEM260Q9NX78 707 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 DUSP12Q9UNI6 340 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 USTQ9Y2C2 406 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 IGF2RP11717 2491 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 BPTFQ12830 3046 aa6.23□□□□□ -1.41
HERC1-213ENST00000561359 CACNA1IQ9P0X4 2223 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 SLC30A4O14863 429 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 PPFIA4O75335 1185 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 FGF18O76093 207 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 EOMESO95936 686 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 PROS1P07225 676 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 THBS1P07996 1170 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 STAG3L1P0CL83 205 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 SMIM10L2AP0DMW4 78 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 SMIM10L2BP0DMW5 78 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 GNAT1P11488 350 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 ADD2P35612 726 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 SLC16A2P36021 539 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 MAP2K3P46734 347 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 RARSP54136 660 aaKnown RBP6.22□□□□□ -1.41
HERC1-213ENST00000561359 APOBRQ0VD83 1088 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 KCNC3Q14003 757 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 STXBP2Q15833 593 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 ATAT1Q5SQI0 421 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 RARS2Q5T160 578 aaKnown RBP6.22□□□□□ -1.41
HERC1-213ENST00000561359 XRRA1Q6P2D8 792 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 FIGNL1Q6PIW4 674 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 NPAS4Q8IUM7 802 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 NEDD1Q8NHV4 660 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 NETO1Q8TDF5 533 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 CLEC4DQ8WXI8 215 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 ACSF2Q96CM8 615 aaPredicted RBP6.22□□□□□ -1.41
HERC1-213ENST00000561359 ABHD17AQ96GS6 310 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 SPATA33Q96N06 139 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.22□□□□□ -1.414e-7■■■□□ 14.7
HERC1-213ENST00000561359 RANBP17Q9H2T7 1088 aaKnown RBP6.22□□□□□ -1.41
HERC1-213ENST00000561359 CRISPLD1Q9H336 500 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 RNPEPQ9H4A4 650 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 TBC1D17Q9HA65 648 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 MRS2Q9HD23 443 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 TFIP11Q9UBB9 837 aaKnown RBP6.22□□□□□ -1.41
HERC1-213ENST00000561359 DDX41Q9UJV9 622 aaKnown RBP6.22□□□□□ -1.41
HERC1-213ENST00000561359 GMEB2Q9UKD1 530 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 LRFN2Q9ULH4 789 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 ATXN7L1Q9ULK2 861 aaPredicted RBP6.22□□□□□ -1.41
HERC1-213ENST00000561359 CA14Q9ULX7 337 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 ZNF232Q9UNY5 417 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 SMG5Q9UPR3 1016 aaKnown RBP6.22□□□□□ -1.41
HERC1-213ENST00000561359 SIT1Q9Y3P8 196 aa6.22□□□□□ -1.41
HERC1-213ENST00000561359 MRVI1Q9Y6F6 885 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms