RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 IGKV6-21A0A0C4DH24 114 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 BTBD18B2RXH4 712 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 GPR182O15218 404 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 RB1P06400 928 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 STAG3L1P0CL83 205 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 FAM189BP81408 668 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 PPP2R5CQ13362 524 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 ANKRD1Q15327 319 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 AAK1Q2M2I8 961 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 XKR3Q5GH77 459 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 PPP4R3AQ6IN85 833 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 LRRC55Q6ZSA7 311 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 EP400NLQ6ZTU2 488 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 FAM177A1Q8N128 213 aaPredicted RBP19.94■□□□□ 0.78
HDDC3-205ENST00000559898 RDM1Q8NG50 284 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 MAP7D2Q96T17 732 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 KIF2CQ99661 725 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 RGL1Q9NZL6 768 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 RAPGEFL1Q9UHV5 662 aa19.94■□□□□ 0.78
HDDC3-205ENST00000559898 DARSP14868 501 aaKnown RBP19.93■□□□□ 0.78
HDDC3-205ENST00000559898 EIF4BP23588 611 aaKnown RBP19.93■□□□□ 0.78
HDDC3-205ENST00000559898 KRT2P35908 639 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 GUCY1B3Q02153 619 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 SPIRE1Q08AE8 756 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 LEXMQ3ZCV2 418 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 C8orf34Q49A92 452 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 TIGD5Q53EQ6 642 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 SLC24A5Q71RS6 500 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 NEK9Q8TD19 979 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 C11orf84Q9BUA3 381 aaPredicted RBP19.93■□□□□ 0.78
HDDC3-205ENST00000559898 IGFLR1Q9H665 355 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 CWH43Q9H720 699 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 BDP1A6H8Y1 2624 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 C5orf42Q9H799 3197 aa19.93■□□□□ 0.78
HDDC3-205ENST00000559898 A0A087WWV3 80 aa19.92■□□□□ 0.78
HDDC3-205ENST00000559898 A0A087WZ62 844 aa19.92■□□□□ 0.78
HDDC3-205ENST00000559898 PBX3P40426 434 aa19.92■□□□□ 0.78
HDDC3-205ENST00000559898 COL19A1Q14993 1142 aa19.92■□□□□ 0.78
HDDC3-205ENST00000559898 CLUL1Q15846 466 aa19.92■□□□□ 0.78
HDDC3-205ENST00000559898 NCAPH2Q6IBW4 605 aa19.92■□□□□ 0.78
HDDC3-205ENST00000559898 DYDC2Q96IM9 177 aa19.92■□□□□ 0.78
HDDC3-205ENST00000559898 FDXACB1Q9BRP7 624 aaPredicted RBP19.92■□□□□ 0.78
HDDC3-205ENST00000559898 TYW1Q9NV66 732 aaKnown RBP19.92■□□□□ 0.78
HDDC3-205ENST00000559898 CLDND1Q9NY35 253 aa19.92■□□□□ 0.78
HDDC3-205ENST00000559898 MAFO75444 373 aaPredicted RBP19.91■□□□□ 0.78
HDDC3-205ENST00000559898 MMP1P03956 469 aa19.91■□□□□ 0.78
HDDC3-205ENST00000559898 ATF7P17544 494 aaPredicted RBP19.91■□□□□ 0.78
HDDC3-205ENST00000559898 TMOD1P28289 359 aa19.91■□□□□ 0.78
HDDC3-205ENST00000559898 PSMC5P62195 406 aa19.91■□□□□ 0.78
HDDC3-205ENST00000559898 CTTNQ14247 550 aaKnown RBP19.91■□□□□ 0.78
HDDC3-205ENST00000559898 CCDC83Q8IWF9 413 aa19.91■□□□□ 0.78
HDDC3-205ENST00000559898 POF1BQ8WVV4 589 aa19.91■□□□□ 0.78
HDDC3-205ENST00000559898 NLRP7Q8WX94 980 aa19.91■□□□□ 0.78
HDDC3-205ENST00000559898 FAM20AQ96MK3 541 aa19.91■□□□□ 0.78
HDDC3-205ENST00000559898 CASD1Q96PB1 797 aa19.91■□□□□ 0.78
HDDC3-205ENST00000559898 EPHX3Q9H6B9 360 aa19.91■□□□□ 0.78
HDDC3-205ENST00000559898 C1orf112Q9NSG2 853 aa19.91■□□□□ 0.78
HDDC3-205ENST00000559898 NCOR1O75376 2440 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 XBP1P17861 261 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 RBM10P98175 930 aaKnown RBP19.9■□□□□ 0.78
HDDC3-205ENST00000559898 CYP4A11Q02928 519 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 LONRF3Q496Y0 759 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 CLLU1OSQ5K130 101 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 PTCRAQ6ISU1 281 aaPredicted RBP19.9■□□□□ 0.78
HDDC3-205ENST00000559898 ECHDC2Q86YB7 292 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 RHPN2Q8IUC4 686 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 DIS3L2Q8IYB7 885 aaKnown RBP19.9■□□□□ 0.78
HDDC3-205ENST00000559898 RNF169Q8NCN4 708 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 P2RX5Q93086 422 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 PABPC5Q96DU9 382 aaKnown RBP19.9■□□□□ 0.78
HDDC3-205ENST00000559898 SCLT1Q96NL6 688 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 PLVAPQ9BX97 442 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 TMEM161AQ9NX61 479 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 SUCLA2Q9P2R7 463 aaPredicted RBP19.9■□□□□ 0.78
HDDC3-205ENST00000559898 RWDD3Q9Y3V2 267 aa19.9■□□□□ 0.78
HDDC3-205ENST00000559898 MEIS3P2A8K0S8 358 aa19.89■□□□□ 0.77
HDDC3-205ENST00000559898 TBX10O75333 385 aa19.89■□□□□ 0.77
HDDC3-205ENST00000559898 GCFC2P16383 781 aaKnown RBP19.89■□□□□ 0.77
HDDC3-205ENST00000559898 QARSP47897 775 aaKnown RBP19.89■□□□□ 0.77
HDDC3-205ENST00000559898 CTC1Q2NKJ3 1217 aa19.89■□□□□ 0.77
HDDC3-205ENST00000559898 ZNF598Q86UK7 904 aaKnown RBP19.89■□□□□ 0.77
HDDC3-205ENST00000559898 COLGALT1Q8NBJ5 622 aa19.89■□□□□ 0.77
HDDC3-205ENST00000559898 WASF1Q92558 559 aa19.89■□□□□ 0.77
HDDC3-205ENST00000559898 TMEM143Q96AN5 459 aa19.89■□□□□ 0.77
HDDC3-205ENST00000559898 LXNQ9BS40 222 aa19.89■□□□□ 0.77
HDDC3-205ENST00000559898 LMAN2LQ9H0V9 348 aa19.89■□□□□ 0.77
HDDC3-205ENST00000559898 TMEM60Q9H2L4 133 aa19.89■□□□□ 0.77
HDDC3-205ENST00000559898 ATP6V0A4Q9HBG4 840 aa19.89■□□□□ 0.77
HDDC3-205ENST00000559898 CYP26B1Q9NR63 512 aa19.89■□□□□ 0.77
HDDC3-205ENST00000559898 GRXCR2A6NFK2 248 aa19.88■□□□□ 0.77
HDDC3-205ENST00000559898 P4HBP07237 508 aaKnown RBP19.88■□□□□ 0.77
HDDC3-205ENST00000559898 ERVFC1P60507 584 aa19.88■□□□□ 0.77
HDDC3-205ENST00000559898 EPHA7Q15375 998 aa19.88■□□□□ 0.77
HDDC3-205ENST00000559898 SPOUT1Q5T280 376 aaKnown RBP19.88■□□□□ 0.77
HDDC3-205ENST00000559898 RBM23Q86U06 439 aaKnown RBP19.88■□□□□ 0.77
HDDC3-205ENST00000559898 LPPQ93052 612 aa19.88■□□□□ 0.77
HDDC3-205ENST00000559898 NLRP4Q96MN2 994 aa19.88■□□□□ 0.77
HDDC3-205ENST00000559898 MINDY3Q9H8M7 445 aa19.88■□□□□ 0.77
HDDC3-205ENST00000559898 TBX3O15119 743 aa19.87■□□□□ 0.77
HDDC3-205ENST00000559898 CENPBP07199 599 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms