RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 EPB41P11171 864 aaKnown RBP15.15■□□□□ 0.02
TPM1-215ENST00000558868 SLC26A2P50443 739 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 NCKAP1LP55160 1127 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 RBL2Q08999 1139 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 LAMC2Q13753 1193 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 TSR1Q2NL82 804 aaKnown RBP15.15■□□□□ 0.02
TPM1-215ENST00000558868 FIGNQ5HY92 759 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 MIIPQ5JXC2 388 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 MAEAQ7L5Y9 396 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 PLPPR4Q7Z2D5 763 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 FBXO16Q8IX29 292 aaPredicted RBP15.15■□□□□ 0.02
TPM1-215ENST00000558868 TC2NQ8N9U0 490 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 HHIPL1Q96JK4 782 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 SPATA33Q96N06 139 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 BAG1Q99933 345 aaPredicted RBP15.15■□□□□ 0.02
TPM1-215ENST00000558868 MKNK1Q9BUB5 465 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 TMX1Q9H3N1 280 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 POLD4Q9HCU8 107 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 KCND1Q9NSA2 647 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 ARMCX3Q9UH62 379 aaPredicted RBP15.15■□□□□ 0.02
TPM1-215ENST00000558868 WDR81Q562E7 1941 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 ADGRA2Q96PE1 1338 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 TMEM150BA6NC51 233 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 ARHGAP6O43182 974 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 MFAP3LO75121 409 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 ARIH2O95376 493 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 TCF7P36402 384 aaPredicted RBP15.14■□□□□ 0.01
TPM1-215ENST00000558868 POLGP54098 1239 aaPredicted RBP15.14■□□□□ 0.01
TPM1-215ENST00000558868 PEX3P56589 373 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 GTF2BQ00403 316 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 IRF5Q13568 498 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 MTERF2Q49AM1 385 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 ZC2HC1CQ53FD0 456 aaPredicted RBP15.14■□□□□ 0.01
TPM1-215ENST00000558868 HAUS6Q7Z4H7 955 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 IFNL1Q8IU54 200 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 SLC9A9Q8IVB4 645 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 TRIM59Q8IWR1 403 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 TMEM174Q8WUU8 243 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 EEF2KMTQ96G04 330 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 PCMTD1Q96MG8 357 aaPredicted RBP15.14■□□□□ 0.01
TPM1-215ENST00000558868 GPR20Q99678 358 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 NTPCRQ9BSD7 190 aaKnown RBP15.14■□□□□ 0.01
TPM1-215ENST00000558868 ZFYVE28Q9HCC9 887 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 PDLIM7Q9NR12 457 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.14■□□□□ 0.01
TPM1-215ENST00000558868 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.14■□□□□ 0.01
TPM1-215ENST00000558868 ZNF236Q9UL36 1845 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 MYH9P35579 1960 aaKnown RBP15.14■□□□□ 0.01
TPM1-215ENST00000558868 DOCK5Q9H7D0 1870 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 PLXNA1Q9UIW2 1896 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 EMSYQ7Z589 1322 aa15.14■□□□□ 0.01
TPM1-215ENST00000558868 IGF2BP3O00425 579 aaKnown RBP eCLIP15.13■□□□□ 0.01
TPM1-215ENST00000558868 TGFB1I1O43294 461 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 GAS2O43903 313 aaKnown RBP15.13■□□□□ 0.01
TPM1-215ENST00000558868 GH1P01241 217 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 GYPCP04921 128 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 CASP14P31944 242 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 PSMC2P35998 433 aaKnown RBP15.13■□□□□ 0.01
TPM1-215ENST00000558868 ADKP55263 362 aaKnown RBP15.13■□□□□ 0.01
TPM1-215ENST00000558868 MAPK8IP2Q13387 824 aaPredicted RBP15.13■□□□□ 0.01
TPM1-215ENST00000558868 PPP2R5AQ15172 486 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 SYCP1Q15431 976 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 PTPN21Q16825 1174 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 TRMT1LQ7Z2T5 733 aaKnown RBP15.13■□□□□ 0.01
TPM1-215ENST00000558868 C12orf56Q8IXR9 622 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 ZNF397Q8NF99 534 aaPredicted RBP15.13■□□□□ 0.01
TPM1-215ENST00000558868 SLC7A3Q8WY07 619 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 BBXQ8WY36 941 aaPredicted RBP15.13■□□□□ 0.01
TPM1-215ENST00000558868 GLG1Q92896 1179 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 PCYT2Q99447 389 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 JPH2Q9BR39 696 aaPredicted RBP15.13■□□□□ 0.01
TPM1-215ENST00000558868 SMARCAD1Q9H4L7 1026 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 KMT5AQ9NQR1 393 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 AGPAT3Q9NRZ7 376 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 CPA4Q9UI42 421 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 CAPN11Q9UMQ6 739 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 FRMD4BQ9Y2L6 1034 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 LUC7L2Q9Y383 392 aaKnown RBP15.13■□□□□ 0.01
TPM1-215ENST00000558868 ARID2Q68CP9 1835 aa15.13■□□□□ 0.01
TPM1-215ENST00000558868 ZMYM2Q9UBW7 1377 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 A0A1W2PQJ5 194 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 CCDC169A6NNP5 214 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 NKRFO15226 690 aaKnown RBP eCLIP15.12■□□□□ 0.01
TPM1-215ENST00000558868 TRIM21P19474 475 aaKnown RBP15.12■□□□□ 0.01
TPM1-215ENST00000558868 ATP4AP20648 1035 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 LBX1P52954 281 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 HSP90AA2PQ14568 343 aaPredicted RBP15.12■□□□□ 0.01
TPM1-215ENST00000558868 EMC2Q15006 297 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 TAPT1Q6NXT6 567 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 CPLX3Q8WVH0 158 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 EMID1Q96A84 441 aaPredicted RBP15.12■□□□□ 0.01
TPM1-215ENST00000558868 MAML3Q96JK9 1138 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 SH2D3AQ9BRG2 576 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 EDEM3Q9BZQ6 932 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 ABHD16BQ9H3Z7 469 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 DHX33Q9H6R0 707 aaKnown RBP15.12■□□□□ 0.01
TPM1-215ENST00000558868 ABT1Q9ULW3 272 aaKnown RBP15.12■□□□□ 0.01
TPM1-215ENST00000558868 TELO2Q9Y4R8 837 aa15.12■□□□□ 0.01
TPM1-215ENST00000558868 TMEM88BA6NKF7 163 aa15.11■□□□□ 0.01
TPM1-215ENST00000558868 CLIC2O15247 247 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms