RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 FAF2Q96CS3 445 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TRAIPQ9BWF2 469 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ALG6Q9Y672 507 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 MECOMQ03112 1051 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 SLC5A9Q2M3M2 681 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 PAPD7Q5XG87 772 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TAGAPQ8N103 731 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RYBPQ8N488 228 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 GRK7Q8WTQ7 553 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ACAP3Q96P50 834 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 CSRNP1Q96S65 589 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ATP2B4P23634 1241 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RNF135Q8IUD6 432 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 GIPC2Q8TF65 315 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TELO2Q9Y4R8 837 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 PPME1Q9Y570 386 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 AGTP01019 485 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 LONRF1Q17RB8 773 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 KIAA1755Q5JYT7 1200 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 KDM7AQ6ZMT4 941 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TGFBRAP1Q8WUH2 860 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TBC1D10AQ9BXI6 508 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 IL1RL2Q9HB29 575 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 CNOT7Q9UIV1 285 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 NFIBO00712 420 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 SLC1A4P43007 532 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 CATSPER3Q86XQ3 398 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RIOK1Q9BRS2 568 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 VPS51Q9UID3 782 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 H0YC42 278 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 KPNA4O00629 521 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 CCNYQ8ND76 341 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 CDHR2Q9BYE9 1310 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 MBD4O95243 580 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 KRT4P19013 534 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ABCE1P61221 599 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 SPIDRQ14159 915 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ZC3H12BQ5HYM0 836 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 LAYNQ6UX15 382 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 LRRC6Q86X45 466 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 NEK9Q8TD19 979 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ANKS1AQ92625 1134 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RANBP17Q9H2T7 1088 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 KRT38O76015 456 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 SPATA5Q8NB90 893 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 EME1Q96AY2 570 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 SLITRK6Q9H5Y7 841 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 MAP10Q9P2G4 905 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 SEMA3EO15041 775 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 HSPA6P17066 643 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ATF7P17544 494 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 VCAM1P19320 739 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TCN1P20061 433 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 DLATP10515 647 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 KCNA3P22001 575 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 MORF4L2Q15014 288 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 USP33Q8TEY7 942 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 PLCG2P16885 1265 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 CARTPTQ16568 116 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 PHC3Q8NDX5 983 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 NPHS2Q9NP85 383 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 NRBP2Q9NSY0 501 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TAGLN3Q9UI15 199 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 IRS4O14654 1257 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 DRD4P21917 467 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 EDEM3Q9BZQ6 932 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 SYBUQ9NX95 663 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 A1BGP04217 495 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 DYNLT1P63172 113 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 CNGA3Q16281 694 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 MEI1Q5TIA1 1274 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 CASP10Q92851 521 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 DDX25Q9UHL0 483 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 C15orf41Q9Y2V0 281 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 IQANK1A0A1B0GTG1 560 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 FMNL1O95466 1100 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 SP4Q02446 784 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 MKRN3Q13064 507 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 A0A1B0GTH6 734 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RASGRF1Q13972 1273 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 NUP93Q8N1F7 819 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 SELENONQ9NZV5 590 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ADD3Q9UEY8 706 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RIMBP2O15034 1052 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 NPR1P16066 1061 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 EXOC8Q8IYI6 725 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RPS6KC1Q96S38 1066 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TRIM15Q9C019 465 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 EXOC1LA0A1B0GW35 172 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TBC1D12O60347 775 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 FOLH1Q04609 750 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 PPP1R2P3Q6NXS1 205 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 CCDC60Q8IWA6 550 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 C1orf131Q8NDD1 294 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RUVBL2Q9Y230 463 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 BAZ2BQ9UIF8 2168 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 SOS1Q07889 1333 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PDE2AO00408 941 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 FAM58BPP0C7Q3 252 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms