RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TACO1Q9BSH4 297 aaKnown RBP6.83□□□□□ -1.32
SYNE2-210ENST00000553455 GEMIN8Q9NWZ8 242 aaKnown RBP6.83□□□□□ -1.32
SYNE2-210ENST00000553455 GABBR1Q9UBS5 961 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 DPP7Q9UHL4 492 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 PRSS50Q9UI38 385 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 TUBD1Q9UJT1 453 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 A0A0A6YYJ9 748 aa6.82□□□□□ -1.32
SYNE2-210ENST00000553455 N4BP3O15049 544 aa6.82□□□□□ -1.32
SYNE2-210ENST00000553455 SEMA7AO75326 666 aa6.82□□□□□ -1.32
SYNE2-210ENST00000553455 CT47B1P0C2W7 299 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-210ENST00000553455 MTHFD2P13995 350 aa6.82□□□□□ -1.32
SYNE2-210ENST00000553455 ATF3P18847 181 aa6.82□□□□□ -1.32
SYNE2-210ENST00000553455 STPG3Q8N7X2 389 aa6.82□□□□□ -1.32
SYNE2-210ENST00000553455 RPGRQ92834 1020 aaKnown RBP6.82□□□□□ -1.32
SYNE2-210ENST00000553455 NUP88Q99567 741 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-210ENST00000553455 C11orf84Q9BUA3 381 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-210ENST00000553455 HAPLN2Q9GZV7 340 aa6.82□□□□□ -1.32
SYNE2-210ENST00000553455 PCDH18Q9HCL0 1135 aa6.82□□□□□ -1.32
SYNE2-210ENST00000553455 ZBTB21Q9ULJ3 1066 aa6.82□□□□□ -1.32
SYNE2-210ENST00000553455 CDY2AQ9Y6F7 541 aa6.82□□□□□ -1.32
SYNE2-210ENST00000553455 NDUFS2O75306 463 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 LIMS1P48059 325 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 IRAK1P51617 712 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 FOXO4P98177 505 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 CD83Q01151 205 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 PPARAQ07869 468 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 MLANAQ16655 118 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 EPM2AIP1Q7L775 607 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-210ENST00000553455 LINC00482Q8N8I6 264 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 OR5AN1Q8NGI8 311 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 RSAD2Q8WXG1 361 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 IFT122Q9HBG6 1241 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 ANLNQ9NQW6 1124 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 FAM53CQ9NYF3 392 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 KCMF1Q9P0J7 381 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 FTSJ1Q9UET6 329 aa6.81□□□□□ -1.32
SYNE2-210ENST00000553455 LRRC10BA6NIK2 292 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 KIF3BO15066 747 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 PRC1O43663 620 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 IL33O95760 270 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 COL6A1P12109 1028 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 LPOP22079 712 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-210ENST00000553455 GNALP38405 381 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 SLC5A3P53794 718 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 NFATC3Q12968 1075 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 SPIDRQ14159 915 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 MBNL2Q5VZF2 373 aaKnown RBP6.8□□□□□ -1.32
SYNE2-210ENST00000553455 BCL6BQ8N143 479 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-210ENST00000553455 KYQ8NBH2 561 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 OR14C36Q8NHC7 312 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 AIFM3Q96NN9 605 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 CLIC6Q96NY7 704 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 SLC52A1Q9NWF4 448 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.8□□□□□ -1.32
SYNE2-210ENST00000553455 EVLQ9UI08 416 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-210ENST00000553455 SERPINB13Q9UIV8 391 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 PCDHB6Q9Y5E3 794 aa6.8□□□□□ -1.32
SYNE2-210ENST00000553455 KNG1P01042 644 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 PLA2G1BP04054 148 aaKnown RBP6.79□□□□□ -1.32
SYNE2-210ENST00000553455 CYP2C19P33261 490 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 ADKP55263 362 aaKnown RBP6.79□□□□□ -1.32
SYNE2-210ENST00000553455 ANTXR2P58335 489 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 CDK17Q00537 523 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 RRP12Q5JTH9 1297 aaKnown RBP6.79□□□□□ -1.32
SYNE2-210ENST00000553455 TMEM132EQ6IEE7 984 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 GAREM2Q75VX8 874 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 CXXC5Q7LFL8 322 aaKnown RBP6.79□□□□□ -1.32
SYNE2-210ENST00000553455 BMP8AQ7Z5Y6 402 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 TMEFF1Q8IYR6 380 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 CDYL2Q8N8U2 506 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 GAB3Q8WWW8 586 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 WRNIP1Q96S55 665 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 FDXACB1Q9BRP7 624 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-210ENST00000553455 NOL10Q9BSC4 688 aaKnown RBP6.79□□□□□ -1.32
SYNE2-210ENST00000553455 USP18Q9UMW8 372 aa6.79□□□□□ -1.32
SYNE2-210ENST00000553455 A0A0A6YYK5 440 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-210ENST00000553455 CCDC194A0A1B0GVG4 234 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 SEC24DO94855 1032 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-210ENST00000553455 VCAM1P19320 739 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 GPR15P49685 360 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 DLG4P78352 724 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 CCT2P78371 535 aaKnown RBP6.78□□□□□ -1.32
SYNE2-210ENST00000553455 SMAD4Q13485 552 aaKnown RBP6.78□□□□□ -1.32
SYNE2-210ENST00000553455 GTF2H3Q13889 308 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 ANO4Q32M45 955 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 PRR31Q5SQ13 230 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 TMEM200BQ69YZ2 307 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 TTLL6Q8N841 843 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 FBXO15Q8NCQ5 510 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-210ENST00000553455 ZCCHC14Q8WYQ9 949 aaKnown RBP6.78□□□□□ -1.32
SYNE2-210ENST00000553455 CCDC136Q96JN2 1154 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 SOX7Q9BT81 388 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 SLC12A5Q9H2X9 1139 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 CROTQ9UKG9 612 aa6.78□□□□□ -1.32
SYNE2-210ENST00000553455 VSTM5A8MXK1 200 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 CUTAO60888 179 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 U2AF1L5P0DN76 240 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-210ENST00000553455 TAL1P17542 331 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-210ENST00000553455 AKAP5P24588 427 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 ADCY8P40145 1251 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms