RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 C1orf112Q9NSG2 853 aa19.26■□□□□ 0.67
CHMP1A-208ENST00000550102 SUCLA2Q9P2R7 463 aaPredicted RBP19.26■□□□□ 0.67
CHMP1A-208ENST00000550102 MTUS1Q9ULD2 1270 aa19.26■□□□□ 0.67
CHMP1A-208ENST00000550102 REV3LO60673 3130 aa19.26■□□□□ 0.67
CHMP1A-208ENST00000550102 GTPBP6O43824 516 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 MGEA5O60502 916 aa19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 SLITRK3O94933 977 aa19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 STAG3L1P0CL83 205 aa19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 SARSP49591 514 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 NBR1Q14596 966 aa19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 EMC2Q15006 297 aa19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 RTN4RL1Q86UN2 441 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 ZNF410Q86VK4 478 aa19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 ZNF579Q8NAF0 562 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 ERMNQ8TAM6 284 aa19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 GDPD5Q8WTR4 605 aa19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 ZNF668Q96K58 619 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 SAMD11Q96NU1 681 aa19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 ADAM2Q99965 735 aa19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 RC3H2Q9HBD1 1191 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 RNF216Q9NWF9 866 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 ATG2AQ2TAZ0 1938 aa19.25■□□□□ 0.67
CHMP1A-208ENST00000550102 UNC80Q8N2C7 3258 aa19.24■□□□□ 0.67
CHMP1A-208ENST00000550102 TOB1P50616 345 aaPredicted RBP19.24■□□□□ 0.67
CHMP1A-208ENST00000550102 CUL4AQ13619 759 aa19.24■□□□□ 0.67
CHMP1A-208ENST00000550102 RHPN2Q8IUC4 686 aa19.24■□□□□ 0.67
CHMP1A-208ENST00000550102 FBXO22Q8NEZ5 403 aa19.24■□□□□ 0.67
CHMP1A-208ENST00000550102 PSPC1Q8WXF1 523 aaKnown RBP19.24■□□□□ 0.67
CHMP1A-208ENST00000550102 C17orf80Q9BSJ5 609 aa19.24■□□□□ 0.67
CHMP1A-208ENST00000550102 GCOM2Q9BZD3 368 aaPredicted RBP19.24■□□□□ 0.67
CHMP1A-208ENST00000550102 TUFT1Q9NNX1 390 aa19.24■□□□□ 0.67
CHMP1A-208ENST00000550102 ANKEF1Q9NU02 776 aa19.24■□□□□ 0.67
CHMP1A-208ENST00000550102 LRFN2Q9ULH4 789 aa19.24■□□□□ 0.67
CHMP1A-208ENST00000550102 RFXAPO00287 272 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 LAD1O00515 517 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 DGKIO75912 1065 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 TECP42680 631 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 GRB10Q13322 594 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 RILPL1Q5EBL4 403 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 HAUS3Q68CZ6 603 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 SLC24A5Q71RS6 500 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 FIBCD1Q8N539 461 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 TCP11Q8WWU5 503 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 NLRP4Q96MN2 994 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 RGS18Q9NS28 235 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 BMP2KQ9NSY1 1161 aaPredicted RBP19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 PCDHB6Q9Y5E3 794 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 COL4A3BPQ9Y5P4 624 aa19.23■□□□□ 0.67
CHMP1A-208ENST00000550102 A0A087WZ62 844 aa19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 ZBTB39O15060 712 aa19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 POU3F3P20264 500 aaPredicted RBP19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 IBSPP21815 317 aaPredicted RBP19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 SFPQP23246 707 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 FXR2P51116 673 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 PTGDRQ13258 359 aa19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 BTG3Q14201 252 aaPredicted RBP19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 DSC3Q14574 896 aa19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 LARP1BQ659C4 914 aaKnown RBP19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 CMTR2Q8IYT2 770 aaKnown RBP19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 CRIPAKQ8N1N5 446 aa19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 MICALL1Q8N3F8 863 aa19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 TMEM143Q96AN5 459 aa19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 ZNF689Q96CS4 500 aaPredicted RBP19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 MTRQ99707 1265 aa19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 FDXACB1Q9BRP7 624 aaPredicted RBP19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 POLR3CQ9BUI4 534 aaPredicted RBP19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 RAB34Q9BZG1 259 aa19.22■□□□□ 0.67
CHMP1A-208ENST00000550102 MYH15Q9Y2K3 1946 aa19.21■□□□□ 0.67
CHMP1A-208ENST00000550102 C9IYK1 514 aa19.21■□□□□ 0.67
CHMP1A-208ENST00000550102 SPATA31C1P0DKV0 1188 aa19.21■□□□□ 0.67
CHMP1A-208ENST00000550102 RARRES1P49788 294 aa19.21■□□□□ 0.67
CHMP1A-208ENST00000550102 EPC2Q52LR7 807 aa19.21■□□□□ 0.67
CHMP1A-208ENST00000550102 C4orf32Q8N8J7 132 aa19.21■□□□□ 0.67
CHMP1A-208ENST00000550102 INO80BQ9C086 356 aaPredicted RBP19.21■□□□□ 0.67
CHMP1A-208ENST00000550102 ATP6V0A4Q9HBG4 840 aa19.21■□□□□ 0.67
CHMP1A-208ENST00000550102 RWDD3Q9Y3V2 267 aa19.21■□□□□ 0.67
CHMP1A-208ENST00000550102 PCDHB7Q9Y5E2 793 aa19.21■□□□□ 0.67
CHMP1A-208ENST00000550102 MTCH2Q9Y6C9 303 aa19.21■□□□□ 0.67
CHMP1A-208ENST00000550102 LPXNO60711 386 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 MED24O75448 989 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 DGAT1O75907 488 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 ZSCAN20P17040 1043 aaPredicted RBP19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 PDCP20941 246 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 FGFR4P22455 802 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 RPA1P27694 616 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 CTNNB1P35222 781 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 PRPHP41219 470 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 LAMTOR4Q0VGL1 99 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 POTEGQ6S5H5 508 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 CATSPER3Q86XQ3 398 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 KSR1Q8IVT5 923 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 TMEM192Q8IY95 271 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 PIGOQ8TEQ8 1089 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 PRPF31Q8WWY3 499 aaKnown RBP19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 PPM1EQ8WY54 764 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 TMEM161AQ9NX61 479 aa19.2■□□□□ 0.66
CHMP1A-208ENST00000550102 CUL9Q8IWT3 2517 aa19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 K7ELQ4 463 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms