RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 OATP04181 439 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 HOXD8P13378 290 aaPredicted RBP8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 CYBAP13498 195 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 GUCY2CP25092 1073 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 SOX10P56693 466 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 TNFAIP2Q03169 654 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 STK4Q13043 487 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 LAMC2Q13753 1193 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 XKR9Q5GH70 373 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 XKR3Q5GH77 459 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 TRMT1LQ7Z2T5 733 aaKnown RBP8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 SFR1Q86XK3 245 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 CCDC65Q8IXS2 484 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 TRMT44Q8IYL2 757 aaKnown RBP8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 MLKLQ8NB16 471 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 OR6J1Q8NGC5 347 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 PPTC7Q8NI37 304 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 AFG1LQ8WV93 481 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 FIZ1Q96SL8 496 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 HSD3B7Q9H2F3 369 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 SLC39A2Q9NP94 309 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 PDLIM7Q9NR12 457 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 SRRDQ9UH36 339 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 SFI1A8K8P3 1242 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 ZBTB42B2RXF5 422 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 NOP56O00567 594 aaKnown RBP8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 DKC1O60832 514 aaKnown RBP eCLIP8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 HIP1RO75146 1068 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 CAVIN2O95810 425 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 LGALS2P05162 132 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 KRT18P05783 430 aaKnown RBP8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 MMP3P08254 477 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 MARK3P27448 753 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 MRE11P49959 708 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 STAT5BP51692 787 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 CASP5P51878 434 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 ZNF131P52739 623 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 PMS1P54277 932 aaKnown RBP8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 KIF22Q14807 665 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 ARHGEF6Q15052 776 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 PLCB4Q15147 1175 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 TARBP2Q15633 366 aaKnown RBP8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 MTERF2Q49AM1 385 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 COBLL1Q53SF7 1204 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 FAM26FQ5R3K3 315 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 FAM160B1Q5W0V3 765 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 KLHL10Q6JEL2 608 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 FBXO46Q6PJ61 603 aaPredicted RBP8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 TLK2Q86UE8 772 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 ADSSL1Q8N142 457 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 CCDC47Q96A33 483 aaKnown RBP8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 C16orf70Q9BSU1 422 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 GPRC5CQ9NQ84 441 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 XPNPEP1Q9NQW7 623 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 KCND2Q9NZV8 630 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 TBC1D7Q9P0N9 293 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 ODF2LQ9ULJ1 636 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 CTNND2Q9UQB3 1225 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 MAPK8IP1Q9UQF2 711 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 SCN10AQ9Y5Y9 1956 aa8.97□□□□□ -0.97
DEPDC4-207ENST00000549249 TRIM49BA6NDI0 452 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 IKBKBO14920 756 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 FAM13AO94988 1023 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 ZNF286BP0CG31 522 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 ELNP15502 786 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 DNAJB2P25686 324 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 ERCC5P28715 1186 aaPredicted RBP8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 STX17P56962 302 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 CACNB2Q08289 660 aaPredicted RBP8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 PSMD2Q13200 908 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 LAPTM4AQ15012 233 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 LRRC41Q15345 812 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 UVSSAQ2YD98 709 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 HERC4Q5GLZ8 1057 aaPredicted RBP8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 CT47A1Q5JQC4 288 aaPredicted RBP8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 MFSD14CQ5VZR4 134 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 MAEAQ7L5Y9 396 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 OTUD6AQ7L8S5 288 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 PLPPR4Q7Z2D5 763 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 NELFBQ8WX92 580 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 ERO1AQ96HE7 468 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 CEP170P1Q96L14 293 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 NIFKQ9BYG3 293 aaKnown RBP8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 NAT10Q9H0A0 1025 aaKnown RBP8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 ZHX3Q9H4I2 956 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 DHX33Q9H6R0 707 aaKnown RBP8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 CYP26B1Q9NR63 512 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 NRBP1Q9UHY1 535 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 DACH1Q9UI36 760 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 FAM184BQ9ULE4 1060 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 SYNRGQ9UMZ2 1314 aa8.96□□□□□ -0.98
DEPDC4-207ENST00000549249 MYADML2A6NDP7 307 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 RCCD1A6NED2 376 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 DYNC1LI2O43237 492 aaPredicted RBP8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 ADCY3O60266 1144 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 TBCAO75347 108 aaKnown RBP8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 MYBP10242 640 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 AKR1A1P14550 325 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 GAP43P17677 238 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 CCND3P30281 292 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms