RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 ZSWIM6Q9HCJ5 1215 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 PCDHA4Q9UN74 947 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 ZDBF2Q9HCK1 2354 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 CPLX1O14810 134 aa15.93■□□□□ 0.14
SNHG1-213ENST00000540725 HOXA2O43364 376 aa15.93■□□□□ 0.14
SNHG1-213ENST00000540725 EPB41L2O43491 1005 aaKnown RBP15.93■□□□□ 0.14
SNHG1-213ENST00000540725 ZSCAN20P17040 1043 aaPredicted RBP15.93■□□□□ 0.14
SNHG1-213ENST00000540725 LAG3P18627 525 aa15.93■□□□□ 0.14
SNHG1-213ENST00000540725 EIF4BP23588 611 aaKnown RBP15.93■□□□□ 0.14
SNHG1-213ENST00000540725 GPC3P51654 580 aa15.93■□□□□ 0.14
SNHG1-213ENST00000540725 TBC1D8BQ0IIM8 1120 aa15.93■□□□□ 0.14
SNHG1-213ENST00000540725 COASYQ13057 564 aa15.93■□□□□ 0.14
SNHG1-213ENST00000540725 SMRP1Q8NCR6 262 aa15.93■□□□□ 0.14
SNHG1-213ENST00000540725 SCLT1Q96NL6 688 aa15.93■□□□□ 0.14
SNHG1-213ENST00000540725 BARX2Q9UMQ3 279 aaPredicted RBP15.93■□□□□ 0.14
SNHG1-213ENST00000540725 CYP46A1Q9Y6A2 500 aa15.93■□□□□ 0.14
SNHG1-213ENST00000540725 PSMD10O75832 226 aa15.92■□□□□ 0.14
SNHG1-213ENST00000540725 DEXIO95424 95 aa15.92■□□□□ 0.14
SNHG1-213ENST00000540725 TDP2O95551 362 aa15.92■□□□□ 0.14
SNHG1-213ENST00000540725 DARSP14868 501 aaKnown RBP15.92■□□□□ 0.14
SNHG1-213ENST00000540725 ERVFC1P60507 584 aa15.92■□□□□ 0.14
SNHG1-213ENST00000540725 Q4G0T1 1027 aa15.92■□□□□ 0.14
SNHG1-213ENST00000540725 MIER3Q7Z3K6 550 aa15.92■□□□□ 0.14
SNHG1-213ENST00000540725 BLIDQ8IZY5 108 aa15.92■□□□□ 0.14
SNHG1-213ENST00000540725 RDM1Q8NG50 284 aa15.92■□□□□ 0.14
SNHG1-213ENST00000540725 ZNF274Q96GC6 653 aaPredicted RBP15.92■□□□□ 0.14
SNHG1-213ENST00000540725 CASD1Q96PB1 797 aa15.92■□□□□ 0.14
SNHG1-213ENST00000540725 RNF19AQ9NV58 838 aa15.92■□□□□ 0.14
SNHG1-213ENST00000540725 CYP3A7-CYP3A51PA0A087WV96 503 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 M0R2N6 131 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 PER2O15055 1255 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 CYP3A7P24462 503 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 TARBP2Q15633 366 aaKnown RBP15.91■□□□□ 0.14
SNHG1-213ENST00000540725 PDE12Q6L8Q7 609 aaKnown RBP15.91■□□□□ 0.14
SNHG1-213ENST00000540725 ECHDC2Q86YB7 292 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 RNF135Q8IUD6 432 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 ABI1Q8IZP0 508 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 LRRC43Q8N309 656 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 DAGLBQ8NCG7 672 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 LARP6Q9BRS8 491 aaKnown RBP15.91■□□□□ 0.14
SNHG1-213ENST00000540725 TM6SF1Q9BZW5 370 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 SEPT9Q9UHD8 586 aaPredicted RBP15.91■□□□□ 0.14
SNHG1-213ENST00000540725 MUTYHQ9UIF7 546 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 LZTS1Q9Y250 596 aa15.91■□□□□ 0.14
SNHG1-213ENST00000540725 FSD2A1L4K1 749 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 FSCN2O14926 492 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 FGFR4P22455 802 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
SNHG1-213ENST00000540725 RBM10P98175 930 aaKnown RBP15.9■□□□□ 0.14
SNHG1-213ENST00000540725 PLCB3Q01970 1234 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 STK3Q13188 491 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 DRP2Q13474 957 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 NPY5RQ15761 445 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 DUSP6Q16828 381 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 MTERF2Q49AM1 385 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 XKR3Q5GH77 459 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 HERC4Q5GLZ8 1057 aaPredicted RBP15.9■□□□□ 0.14
SNHG1-213ENST00000540725 CPLX2Q6PUV4 134 aaKnown RBP15.9■□□□□ 0.14
SNHG1-213ENST00000540725 KCNT2Q6UVM3 1135 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 B3GNT9Q6UX72 402 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 LRRC55Q6ZSA7 311 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 FAM177A1Q8N128 213 aaPredicted RBP15.9■□□□□ 0.14
SNHG1-213ENST00000540725 RNF169Q8NCN4 708 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 VN1R2Q8NFZ6 395 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 ETNPPLQ8TBG4 499 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 NLRP7Q8WX94 980 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 MRPS27Q92552 414 aaKnown RBP15.9■□□□□ 0.14
SNHG1-213ENST00000540725 MBOAT7Q96N66 472 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 AIFM3Q96NN9 605 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 CDCA3Q99618 268 aaPredicted RBP15.9■□□□□ 0.14
SNHG1-213ENST00000540725 USP15Q9Y4E8 981 aaPredicted RBP15.9■□□□□ 0.14
SNHG1-213ENST00000540725 WDFY4Q6ZS81 3184 aa15.9■□□□□ 0.14
SNHG1-213ENST00000540725 TMEM150BA6NC51 233 aa15.89■□□□□ 0.13
SNHG1-213ENST00000540725 PPM1AP35813 382 aa15.89■□□□□ 0.13
SNHG1-213ENST00000540725 PBX3P40426 434 aa15.89■□□□□ 0.13
SNHG1-213ENST00000540725 NONOQ15233 471 aaKnown RBP eCLIP15.89■□□□□ 0.13
SNHG1-213ENST00000540725 CLLU1OSQ5K130 101 aa15.89■□□□□ 0.13
SNHG1-213ENST00000540725 PLPP4Q5VZY2 271 aa15.89■□□□□ 0.13
SNHG1-213ENST00000540725 GALNT17Q6IS24 598 aa15.89■□□□□ 0.13
SNHG1-213ENST00000540725 MOXD1Q6UVY6 613 aa15.89■□□□□ 0.13
SNHG1-213ENST00000540725 ZNF558Q96NG5 402 aa15.89■□□□□ 0.13
SNHG1-213ENST00000540725 CEP89Q96ST8 783 aa15.89■□□□□ 0.13
SNHG1-213ENST00000540725 NIFKQ9BYG3 293 aaKnown RBP15.89■□□□□ 0.13
SNHG1-213ENST00000540725 PUF60Q9UHX1 559 aaKnown RBP15.89■□□□□ 0.13
SNHG1-213ENST00000540725 A0A0U1RQF3 1178 aa15.88■□□□□ 0.13
SNHG1-213ENST00000540725 CSDE1O75534 798 aaKnown RBP15.88■□□□□ 0.13
SNHG1-213ENST00000540725 STBD1O95210 358 aa15.88■□□□□ 0.13
SNHG1-213ENST00000540725 INF2Q27J81 1249 aa15.88■□□□□ 0.13
SNHG1-213ENST00000540725 KRT25Q7Z3Z0 450 aa15.88■□□□□ 0.13
SNHG1-213ENST00000540725 ZNF598Q86UK7 904 aaKnown RBP15.88■□□□□ 0.13
SNHG1-213ENST00000540725 TCF25Q9BQ70 676 aa15.88■□□□□ 0.13
SNHG1-213ENST00000540725 SH2D3AQ9BRG2 576 aa15.88■□□□□ 0.13
SNHG1-213ENST00000540725 GCOM2Q9BZD3 368 aaPredicted RBP15.88■□□□□ 0.13
SNHG1-213ENST00000540725 ENTPD7Q9NQZ7 604 aa15.88■□□□□ 0.13
SNHG1-213ENST00000540725 PDRG1Q9NUG6 133 aa15.88■□□□□ 0.13
SNHG1-213ENST00000540725 DACT1Q9NYF0 836 aa15.88■□□□□ 0.13
SNHG1-213ENST00000540725 DDX25Q9UHL0 483 aaKnown RBP15.88■□□□□ 0.13
SNHG1-213ENST00000540725 MYO10Q9HD67 2058 aa15.88■□□□□ 0.13
SNHG1-213ENST00000540725 ARID2Q68CP9 1835 aa15.88■□□□□ 0.13
SNHG1-213ENST00000540725 IGKV6-21A0A0C4DH24 114 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms