RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 PPARDQ03181 441 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 FAM178BQ8IXR5 827 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 GOLGA6L1Q8N7Z2 621 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 IL31RAQ8NI17 732 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 ARL8AQ96BM9 186 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 INPP4AQ96PE3 977 aaPredicted RBP12.57□□□□□ -0.4
C11orf54-214ENST00000540113 LXNQ9BS40 222 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 MYOZ2Q9NPC6 264 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 OLFML3Q9NRN5 406 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 HOMER2Q9NSB8 354 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 ANKRD65E5RJM6 399 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 RAD51CO43502 376 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 CEP104O60308 925 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 HSD17B4P51659 736 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 JAM2P57087 298 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 RPS6KA1Q15418 735 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 ARHGAP44Q17R89 818 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 TAF3Q5VWG9 929 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 ZNF720Q7Z2F6 126 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 GLYCTKQ8IVS8 523 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 CPXCR1Q8N123 301 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 ZSWIM2Q8NEG5 633 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 LNX1Q8TBB1 728 aaPredicted RBP12.56□□□□□ -0.4
C11orf54-214ENST00000540113 CASKIN2Q8WXE0 1202 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 TEPSINQ96N21 525 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 WDR11Q9BZH6 1224 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 DEFB129Q9H1M3 183 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 BRCA1P38398 1863 aaKnown RBP12.56□□□□□ -0.4
C11orf54-214ENST00000540113 FRMPD4Q14CM0 1322 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 NFIBO00712 420 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 EVI5O60447 810 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 HIP1RO75146 1068 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 ICAM1P05362 532 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 ASNSP08243 561 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 GAP43P17677 238 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 ABCB4P21439 1286 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 PSMC2P35998 433 aaKnown RBP12.56□□□□□ -0.4
C11orf54-214ENST00000540113 EPHB4P54760 987 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 RASA3Q14644 834 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 R3HDM1Q15032 1099 aaKnown RBP12.56□□□□□ -0.4
C11orf54-214ENST00000540113 CLEC4DQ8WXI8 215 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 TAF4BQ92750 862 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 UPF1Q92900 1129 aaKnown RBP eCLIP12.56□□□□□ -0.45e-11■■■■□ 20.6
C11orf54-214ENST00000540113 HOOK2Q96ED9 719 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 METTL14Q9HCE5 456 aaKnown RBP12.56□□□□□ -0.4
C11orf54-214ENST00000540113 OSGEPQ9NPF4 335 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 TSKSQ9UJT2 592 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 DNAJC12Q9UKB3 198 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 CCPG1Q9ULG6 757 aa12.56□□□□□ -0.4
C11orf54-214ENST00000540113 RPTORQ8N122 1335 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 GOLGA6CA6NDK9 693 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 IPO5O00410 1097 aaKnown RBP12.55□□□□□ -0.4
C11orf54-214ENST00000540113 SLC16A3O15427 465 aaKnown RBP12.55□□□□□ -0.4
C11orf54-214ENST00000540113 KIF4AO95239 1232 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 GOLGA6DP0CG33 693 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 ITGB5P18084 799 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 FMO5P49326 533 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 DLG4P78352 724 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 DRAP1Q14919 205 aaPredicted RBP12.55□□□□□ -0.4
C11orf54-214ENST00000540113 KCTD16Q68DU8 428 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 CIAPIN1Q6FI81 312 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 DDX42Q86XP3 938 aaKnown RBP eCLIP12.55□□□□□ -0.4
C11orf54-214ENST00000540113 KCTD17Q8N5Z5 321 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 USP38Q8NB14 1042 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 CCDC43Q96MW1 224 aaKnown RBP12.55□□□□□ -0.4
C11orf54-214ENST00000540113 ZIM3Q96PE6 472 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 AGPAT3Q9NRZ7 376 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 SEPT11Q9NVA2 429 aaKnown RBP12.55□□□□□ -0.4
C11orf54-214ENST00000540113 GOLGA6AQ9NYA3 693 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 SRCAPQ6ZRS2 3230 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 MYH11P35749 1972 aa12.55□□□□□ -0.4
C11orf54-214ENST00000540113 KRT14P02533 472 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 TTMPQ5BVD1 217 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 DALRD3Q5D0E6 543 aaKnown RBP12.54□□□□□ -0.4
C11orf54-214ENST00000540113 PALB2Q86YC2 1186 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 DAW1Q8N136 415 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 SH2D3CQ8N5H7 860 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 LRRC57Q8N9N7 239 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 TPCN2Q8NHX9 752 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 OLIG1Q8TAK6 271 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 SGIP1Q9BQI5 828 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 EHMT1Q9H9B1 1298 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 ASTN2O75129 1339 aaPredicted RBP12.54□□□□□ -0.4
C11orf54-214ENST00000540113 IGSF9BQ9UPX0 1349 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 ARHGEF35A5YM69 484 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 ITGA4P13612 1032 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 GALCP54803 685 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 MUM1L1Q5H9M0 696 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 METTL13Q8N6R0 699 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 NACC1Q96RE7 527 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 MXRA8Q9BRK3 442 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 TEKT3Q9BXF9 490 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 GDF3Q9NR23 364 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 TAS2R14Q9NYV8 317 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 RSPH14Q9UHP6 348 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 SAMM50Q9Y512 469 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 CD2APQ9Y5K6 639 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 PARP14Q460N5 1801 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms