RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 CABP7Q86V35 215 aa13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 ZNF410Q86VK4 478 aa13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 HERC6Q8IVU3 1022 aa13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 MCPH1Q8NEM0 835 aa13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 PRPF31Q8WWY3 499 aaKnown RBP13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 DHX33Q9H6R0 707 aaKnown RBP13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 SLC28A3Q9HAS3 691 aa13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 CFAP45Q9UL16 551 aa13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 LRFN2Q9ULH4 789 aa13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 ST3GAL5Q9UNP4 418 aa13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 NOC2LQ9Y3T9 749 aaKnown RBP13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 COL4A3BPQ9Y5P4 624 aa13.94□□□□□ -0.18
CYB561A3-213ENST00000539890 IGKV6-21A0A0C4DH24 114 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 PP2D1A8MPX8 630 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 SOX1O00570 391 aaPredicted RBP13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 GPR32O75388 356 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 F13A1P00488 732 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 SFPQP23246 707 aaKnown RBP eCLIP13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 RABGGTBP53611 331 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 IL17AQ16552 155 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 GPR153Q6NV75 609 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 PADI6Q6TGC4 694 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 KCTD17Q8N5Z5 321 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 TIFAQ96CG3 184 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 BHMT2Q9H2M3 363 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 AGO3Q9H9G7 860 aaKnown RBP13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 CDHR5Q9HBB8 845 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 TFIP11Q9UBB9 837 aaKnown RBP13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 CCDC39Q9UFE4 941 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 PCDHA11Q9Y5I1 949 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 ATP6V1DQ9Y5K8 247 aa13.93□□□□□ -0.18
CYB561A3-213ENST00000539890 A0A087WZ62 844 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 ENPP3O14638 875 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 SLC26A4O43511 780 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 STAG3L1P0CL83 205 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 DARSP14868 501 aaKnown RBP13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 DNAJB2P25686 324 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 PHKA2P46019 1235 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 LAMTOR4Q0VGL1 99 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 DRP2Q13474 957 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.92□□□□□ -0.187e-7■■■■■ 29.4
CYB561A3-213ENST00000539890 DEFB123Q8N688 67 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 LINC01465Q8N7H1 131 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 VWCEQ96DN2 955 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 YME1L1Q96TA2 773 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 PLIN2Q99541 437 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 FDXACB1Q9BRP7 624 aaPredicted RBP13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 PBX4Q9BYU1 374 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 ADAMTS10Q9H324 1103 aa13.92□□□□□ -0.18
CYB561A3-213ENST00000539890 E9PMD0 336 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 EYA4O95677 639 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 NCLP19338 710 aaKnown RBP13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 ANP32AP39687 249 aaKnown RBP13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 DEFB103AP81534 67 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 SLC39A14Q15043 492 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 PPP2R2DQ66LE6 453 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 ATL3Q6DD88 541 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 FAM109BQ6ICB4 259 aaPredicted RBP13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 CATSPER4Q7RTX7 472 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 KSR1Q8IVT5 923 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 KRI1Q8N9T8 703 aaKnown RBP13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 RNF149Q8NC42 400 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 IFT74Q96LB3 600 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 FAM161BQ96MY7 647 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 USP28Q96RU2 1077 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 CEP89Q96ST8 783 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 RAD9AQ99638 391 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 ADAM2Q99965 735 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 OSBPL7Q9BZF2 842 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 POLR3FQ9H1D9 316 aaPredicted RBP13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 C1orf112Q9NSG2 853 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 DACT1Q9NYF0 836 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 INSL6Q9Y581 213 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 PCDHB7Q9Y5E2 793 aa13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 SRPRBQ9Y5M8 271 aaKnown RBP13.91□□□□□ -0.18
CYB561A3-213ENST00000539890 LRRIQ4A6NIV6 560 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 SPTLC2O15270 562 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 ERLIN2O94905 339 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 GJB5O95377 273 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 KRT18P05783 430 aaKnown RBP13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 CYP11B2P19099 503 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 PBX2P40425 430 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 PPP2R5AQ15172 486 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 ECM1Q16610 540 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 TMEM132AQ24JP5 1023 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 TCTN1Q2MV58 587 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 SRGAP1Q7Z6B7 1085 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 FAM228AQ86W67 206 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 ZBTB8OSQ8IWT0 167 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 TMEM40Q8WWA1 233 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 TOP1MTQ969P6 601 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 CSRNP2Q9H175 543 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 NKX2-4Q9H2Z4 354 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 ERVK-5Q9HDB9 667 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 SCN5AQ14524 2016 aa13.9□□□□□ -0.18
CYB561A3-213ENST00000539890 TMEM265A0A087WTH1 108 aa13.89□□□□□ -0.19
CYB561A3-213ENST00000539890 INO80B-WBP1J3KQ70 363 aa13.89□□□□□ -0.19
CYB561A3-213ENST00000539890 CSDE1O75534 798 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms