RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 TMOD1P28289 359 aa24.13■■□□□ 1.45
SSH3-211ENST00000534112 PPM1AP35813 382 aa24.13■■□□□ 1.45
SSH3-211ENST00000534112 KRT17Q04695 432 aa24.13■■□□□ 1.45
SSH3-211ENST00000534112 PTPN21Q16825 1174 aa24.13■■□□□ 1.45
SSH3-211ENST00000534112 ECHDC2Q86YB7 292 aa24.13■■□□□ 1.45
SSH3-211ENST00000534112 ABI1Q8IZP0 508 aa24.13■■□□□ 1.45
SSH3-211ENST00000534112 LRRC43Q8N309 656 aa24.13■■□□□ 1.45
SSH3-211ENST00000534112 LRRC71Q8N4P6 559 aa24.13■■□□□ 1.45
SSH3-211ENST00000534112 SPG21Q9NZD8 308 aa24.13■■□□□ 1.45
SSH3-211ENST00000534112 SAMM50Q9Y512 469 aa24.13■■□□□ 1.45
SSH3-211ENST00000534112 EVPLQ92817 2033 aa24.12■■□□□ 1.45
SSH3-211ENST00000534112 HOXB8P17481 243 aaPredicted RBP24.12■■□□□ 1.45
SSH3-211ENST00000534112 CIITAP33076 1130 aa24.12■■□□□ 1.45
SSH3-211ENST00000534112 METAP2P50579 478 aaKnown RBP eCLIP24.12■■□□□ 1.45
SSH3-211ENST00000534112 KRT32Q14532 448 aa24.12■■□□□ 1.45
SSH3-211ENST00000534112 BMP2KLQ5H9B9 411 aa24.12■■□□□ 1.45
SSH3-211ENST00000534112 TMC7Q7Z402 723 aa24.12■■□□□ 1.45
SSH3-211ENST00000534112 ZNF710Q8N1W2 664 aa24.12■■□□□ 1.45
SSH3-211ENST00000534112 CCDC12Q8WUD4 166 aaPredicted RBP24.12■■□□□ 1.45
SSH3-211ENST00000534112 USP34Q70CQ2 3546 aa24.12■■□□□ 1.45
SSH3-211ENST00000534112 CACNA1HO95180 2353 aa24.11■■□□□ 1.45
SSH3-211ENST00000534112 WDR64B1ANS9 1081 aa24.11■■□□□ 1.45
SSH3-211ENST00000534112 ZNF862O60290 1169 aa24.11■■□□□ 1.45
SSH3-211ENST00000534112 HMGB1P09429 215 aaKnown RBP24.11■■□□□ 1.45
SSH3-211ENST00000534112 GNA11P29992 359 aa24.11■■□□□ 1.45
SSH3-211ENST00000534112 FGD1P98174 961 aa24.11■■□□□ 1.45
SSH3-211ENST00000534112 CLLU1OSQ5K130 101 aa24.11■■□□□ 1.45
SSH3-211ENST00000534112 RNF169Q8NCN4 708 aa24.11■■□□□ 1.45
SSH3-211ENST00000534112 LENG9Q96B70 501 aa24.11■■□□□ 1.45
SSH3-211ENST00000534112 ZNF668Q96K58 619 aaPredicted RBP24.11■■□□□ 1.45
SSH3-211ENST00000534112 NRBP2Q9NSY0 501 aa24.11■■□□□ 1.45
SSH3-211ENST00000534112 VCPP55072 806 aaKnown RBP24.1■■□□□ 1.45
SSH3-211ENST00000534112 MRPL43Q8N983 215 aaKnown RBP24.1■■□□□ 1.45
SSH3-211ENST00000534112 DISC1Q9NRI5 854 aa24.1■■□□□ 1.45
SSH3-211ENST00000534112 A0A0U1RQF3 1178 aa24.09■■□□□ 1.45
SSH3-211ENST00000534112 PRPF3O43395 683 aaKnown RBP24.09■■□□□ 1.45
SSH3-211ENST00000534112 OATP04181 439 aa24.09■■□□□ 1.45
SSH3-211ENST00000534112 DARSP14868 501 aaKnown RBP24.09■■□□□ 1.45
SSH3-211ENST00000534112 SP100P23497 879 aaPredicted RBP24.09■■□□□ 1.45
SSH3-211ENST00000534112 AVPR2P30518 371 aa24.09■■□□□ 1.45
SSH3-211ENST00000534112 GPC3P51654 580 aa24.09■■□□□ 1.45
SSH3-211ENST00000534112 ZNF598Q86UK7 904 aaKnown RBP24.09■■□□□ 1.45
SSH3-211ENST00000534112 CASP10Q92851 521 aa24.09■■□□□ 1.45
SSH3-211ENST00000534112 EOMESO95936 686 aa24.08■■□□□ 1.45
SSH3-211ENST00000534112 CPA1P15085 419 aa24.08■■□□□ 1.45
SSH3-211ENST00000534112 PRKCEQ02156 737 aa24.08■■□□□ 1.45
SSH3-211ENST00000534112 SMC1AQ14683 1233 aaKnown RBP24.08■■□□□ 1.45
SSH3-211ENST00000534112 ZBTB33Q86T24 672 aa24.08■■□□□ 1.45
SSH3-211ENST00000534112 SLC39A11Q8N1S5 342 aa24.08■■□□□ 1.45
SSH3-211ENST00000534112 CDH22Q9UJ99 828 aa24.08■■□□□ 1.45
SSH3-211ENST00000534112 HCFC2Q9Y5Z7 792 aa24.08■■□□□ 1.45
SSH3-211ENST00000534112 C2orf71A6NGG8 1288 aa24.07■■□□□ 1.44
SSH3-211ENST00000534112 EDIL3O43854 480 aa24.07■■□□□ 1.44
SSH3-211ENST00000534112 FGFR4P22455 802 aa24.07■■□□□ 1.44
SSH3-211ENST00000534112 TPRNQ4KMQ1 711 aa24.07■■□□□ 1.44
SSH3-211ENST00000534112 SKAP1Q86WV1 359 aa24.07■■□□□ 1.44
SSH3-211ENST00000534112 BICD2Q8TD16 824 aa24.07■■□□□ 1.44
SSH3-211ENST00000534112 HELQQ8TDG4 1101 aa24.07■■□□□ 1.44
SSH3-211ENST00000534112 SCLT1Q96NL6 688 aa24.07■■□□□ 1.44
SSH3-211ENST00000534112 ADAM7Q9H2U9 754 aa24.07■■□□□ 1.44
SSH3-211ENST00000534112 TSHZ2Q9NRE2 1034 aa24.07■■□□□ 1.44
SSH3-211ENST00000534112 NR2E1Q9Y466 385 aa24.07■■□□□ 1.44
SSH3-211ENST00000534112 MSH4O15457 936 aa24.06■■□□□ 1.44
SSH3-211ENST00000534112 UGCGQ16739 394 aa24.06■■□□□ 1.44
SSH3-211ENST00000534112 CES5AQ6NT32 575 aa24.06■■□□□ 1.44
SSH3-211ENST00000534112 Q6ZUG5 572 aa24.06■■□□□ 1.44
SSH3-211ENST00000534112 KREMEN2Q8NCW0 462 aa24.06■■□□□ 1.44
SSH3-211ENST00000534112 NLRP7Q8WX94 980 aa24.06■■□□□ 1.44
SSH3-211ENST00000534112 BRF1Q92994 677 aa24.06■■□□□ 1.44
SSH3-211ENST00000534112 PHKBQ93100 1093 aa24.06■■□□□ 1.44
SSH3-211ENST00000534112 RIT2Q99578 217 aa24.06■■□□□ 1.44
SSH3-211ENST00000534112 DACT1Q9NYF0 836 aa24.06■■□□□ 1.44
SSH3-211ENST00000534112 CLASP2O75122 1294 aaKnown RBP24.05■■□□□ 1.44
SSH3-211ENST00000534112 CSDE1O75534 798 aaKnown RBP24.05■■□□□ 1.44
SSH3-211ENST00000534112 ALDH7A1P49419 539 aaKnown RBP24.05■■□□□ 1.44
SSH3-211ENST00000534112 BCAR1P56945 870 aa24.05■■□□□ 1.44
SSH3-211ENST00000534112 AKAP17AQ02040 695 aaKnown RBP24.05■■□□□ 1.44
SSH3-211ENST00000534112 ITIH3Q06033 890 aa24.05■■□□□ 1.44
SSH3-211ENST00000534112 TBC1D8BQ0IIM8 1120 aa24.05■■□□□ 1.44
SSH3-211ENST00000534112 CCDC136Q96JN2 1154 aa24.05■■□□□ 1.44
SSH3-211ENST00000534112 RIPOR3Q96MK2 946 aa24.05■■□□□ 1.44
SSH3-211ENST00000534112 NECTIN4Q96NY8 510 aa24.05■■□□□ 1.44
SSH3-211ENST00000534112 ZFHX2Q9C0A1 2572 aaPredicted RBP24.05■■□□□ 1.44
SSH3-211ENST00000534112 NT5C1B-RDH14C9J2C7 533 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 CHMP2AO43633 222 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 GAS7O60861 476 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 CXCL14O95715 111 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 PDGFBP01127 241 aaPredicted RBP24.04■■□□□ 1.44
SSH3-211ENST00000534112 SFNP31947 248 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 USP11P51784 963 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 DRP2Q13474 957 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 TARBP2Q15633 366 aaKnown RBP24.04■■□□□ 1.44
SSH3-211ENST00000534112 SLC5A5Q92911 643 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 MRPL9Q9BYD2 267 aaKnown RBP24.04■■□□□ 1.44
SSH3-211ENST00000534112 IRF2BPLQ9H1B7 796 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 UNC45AQ9H3U1 944 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 POMKQ9H5K3 350 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 FAM86C1Q9NVL1 165 aa24.04■■□□□ 1.44
SSH3-211ENST00000534112 MYH9P35579 1960 aaKnown RBP24.03■■□□□ 1.44
SSH3-211ENST00000534112 C2CD4DB7Z1M9 353 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms