RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 MTMR6Q9Y217 621 aa16.64■□□□□ 0.25
NXF1-210ENST00000531579 YBX2Q9Y2T7 364 aaKnown RBP16.64■□□□□ 0.25
NXF1-210ENST00000531579 STAG3L1P0CL83 205 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 HTRA4P83105 476 aaPredicted RBP16.63■□□□□ 0.25
NXF1-210ENST00000531579 POU5F1BQ06416 359 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 DRP2Q13474 957 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 EMC2Q15006 297 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 IL17AQ16552 155 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 PPP2R2DQ66LE6 453 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 RTN4RL1Q86UN2 441 aaPredicted RBP16.63■□□□□ 0.25
NXF1-210ENST00000531579 PIGOQ8TEQ8 1089 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 PRPF31Q8WWY3 499 aaKnown RBP16.63■□□□□ 0.25
NXF1-210ENST00000531579 AK8Q96MA6 479 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 ATP6V0A4Q9HBG4 840 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 RGS18Q9NS28 235 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 C1orf112Q9NSG2 853 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 COL4A3BPQ9Y5P4 624 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 LAMA3Q16787 3333 aa16.63■□□□□ 0.25
NXF1-210ENST00000531579 A0A087WZ62 844 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 DENND3A2RUS2 1198 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 SLC26A4O43511 780 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 CA3P07451 260 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 MYOGP15173 224 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 ZSCAN20P17040 1043 aaPredicted RBP16.62■□□□□ 0.25
NXF1-210ENST00000531579 PCBP1Q15365 356 aaKnown RBP eCLIP16.62■□□□□ 0.25
NXF1-210ENST00000531579 SF3A1Q15459 793 aaKnown RBP16.62■□□□□ 0.25
NXF1-210ENST00000531579 SLC24A5Q71RS6 500 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 FAM228AQ86W67 206 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 MCPH1Q8NEM0 835 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 SNX29Q8TEQ0 813 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 TMEM143Q96AN5 459 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 FAM161BQ96MY7 647 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 PPP1R16BQ96T49 567 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 FDXACB1Q9BRP7 624 aaPredicted RBP16.62■□□□□ 0.25
NXF1-210ENST00000531579 TMX1Q9H3N1 280 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 CHST12Q9NRB3 414 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 KIAA1024Q9UPX6 916 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 DNM3Q9UQ16 869 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 EVPLQ92817 2033 aa16.62■□□□□ 0.25
NXF1-210ENST00000531579 VWA3AA6NCI4 1184 aa16.61■□□□□ 0.25
NXF1-210ENST00000531579 UPP2O95045 317 aa16.61■□□□□ 0.25
NXF1-210ENST00000531579 SFPQP23246 707 aaKnown RBP eCLIP16.61■□□□□ 0.25
NXF1-210ENST00000531579 LAMTOR4Q0VGL1 99 aa16.61■□□□□ 0.25
NXF1-210ENST00000531579 RESTQ13127 1097 aa16.61■□□□□ 0.25
NXF1-210ENST00000531579 TFDP1Q14186 410 aa16.61■□□□□ 0.25
NXF1-210ENST00000531579 SRGAP1Q7Z6B7 1085 aa16.61■□□□□ 0.25
NXF1-210ENST00000531579 YME1L1Q96TA2 773 aa16.61■□□□□ 0.25
NXF1-210ENST00000531579 CDX2Q99626 313 aaPredicted RBP16.61■□□□□ 0.25
NXF1-210ENST00000531579 ADAM2Q99965 735 aa16.61■□□□□ 0.25
NXF1-210ENST00000531579 NT5C3AQ9H0P0 336 aa16.61■□□□□ 0.25
NXF1-210ENST00000531579 STXBP5LQ9Y2K9 1186 aa16.61■□□□□ 0.25
NXF1-210ENST00000531579 ARHGEF35A5YM69 484 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 SRGAP2CP0DJJ0 459 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 CYP11B2P19099 503 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 ARL2P36404 184 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 LONP1P36776 959 aaKnown RBP16.6■□□□□ 0.25
NXF1-210ENST00000531579 FAM189BP81408 668 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 TAP1Q03518 808 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 GRIN2CQ14957 1233 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 FAM117BQ6P1L5 589 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 POTEGQ6S5H5 508 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 PADI6Q6TGC4 694 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 TMCO2Q7Z6W1 182 aaPredicted RBP16.6■□□□□ 0.25
NXF1-210ENST00000531579 NPAS4Q8IUM7 802 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 CRIPAKQ8N1N5 446 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 NLRP4Q96MN2 994 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 ELAC1Q9H777 363 aaKnown RBP16.6■□□□□ 0.25
NXF1-210ENST00000531579 IFT122Q9HBG6 1241 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 XPNPEP1Q9NQW7 623 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 DDX19AQ9NUU7 478 aaKnown RBP16.6■□□□□ 0.25
NXF1-210ENST00000531579 DACT1Q9NYF0 836 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 LRFN2Q9ULH4 789 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 PCDHB7Q9Y5E2 793 aa16.6■□□□□ 0.25
NXF1-210ENST00000531579 A0A087WWV3 80 aa16.59■□□□□ 0.25
NXF1-210ENST00000531579 DGKIO75912 1065 aa16.59■□□□□ 0.25
NXF1-210ENST00000531579 EYA4O95677 639 aa16.59■□□□□ 0.25
NXF1-210ENST00000531579 UBA7P41226 1012 aa16.59■□□□□ 0.25
NXF1-210ENST00000531579 SARSP49591 514 aaKnown RBP16.59■□□□□ 0.25
NXF1-210ENST00000531579 NCBP1Q09161 790 aaKnown RBP16.59■□□□□ 0.25
NXF1-210ENST00000531579 DSC3Q14574 896 aa16.59■□□□□ 0.25
NXF1-210ENST00000531579 HYIQ5T013 277 aa16.59■□□□□ 0.25
NXF1-210ENST00000531579 KSR1Q8IVT5 923 aa16.59■□□□□ 0.25
NXF1-210ENST00000531579 SP7Q8TDD2 431 aaPredicted RBP16.59■□□□□ 0.25
NXF1-210ENST00000531579 LINC01599Q8WXQ3 324 aa16.59■□□□□ 0.25
NXF1-210ENST00000531579 ZNF668Q96K58 619 aaPredicted RBP16.59■□□□□ 0.25
NXF1-210ENST00000531579 GUCD1Q96NT3 240 aa16.59■□□□□ 0.25
NXF1-210ENST00000531579 MORC2Q9Y6X9 1032 aaPredicted RBP16.59■□□□□ 0.25
NXF1-210ENST00000531579 C9IYK1 514 aa16.58■□□□□ 0.24
NXF1-210ENST00000531579 SKIP12755 728 aa16.58■□□□□ 0.24
NXF1-210ENST00000531579 CDC25AP30304 524 aa16.58■□□□□ 0.24
NXF1-210ENST00000531579 PHKA2P46019 1235 aa16.58■□□□□ 0.24
NXF1-210ENST00000531579 BECN1Q14457 450 aa16.58■□□□□ 0.24
NXF1-210ENST00000531579 ECM1Q16610 540 aa16.58■□□□□ 0.24
NXF1-210ENST00000531579 IFNLR1Q8IU57 520 aaPredicted RBP16.58■□□□□ 0.24
NXF1-210ENST00000531579 RNF149Q8NC42 400 aa16.58■□□□□ 0.24
NXF1-210ENST00000531579 ZNF689Q96CS4 500 aaPredicted RBP16.58■□□□□ 0.24
NXF1-210ENST00000531579 CDK5RAP3Q96JB5 506 aa16.58■□□□□ 0.24
NXF1-210ENST00000531579 ZNF396Q96N95 335 aaPredicted RBP16.58■□□□□ 0.24
NXF1-210ENST00000531579 SAMD11Q96NU1 681 aa16.58■□□□□ 0.24
NXF1-210ENST00000531579 TGS1Q96RS0 853 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms