RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 PPP1R16BQ96T49 567 aa12.11□□□□□ -0.47
C11orf54-209ENST00000530620 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
C11orf54-209ENST00000530620 ERVK-5Q9HDB9 667 aa12.11□□□□□ -0.47
C11orf54-209ENST00000530620 ZNF302Q9NR11 478 aa12.11□□□□□ -0.47
C11orf54-209ENST00000530620 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-209ENST00000530620 GINS2Q9Y248 185 aa12.11□□□□□ -0.47
C11orf54-209ENST00000530620 NOC2LQ9Y3T9 749 aaKnown RBP12.11□□□□□ -0.47
C11orf54-209ENST00000530620 PCDHGC5Q9Y5F6 944 aa12.11□□□□□ -0.47
C11orf54-209ENST00000530620 TECTAO75443 2155 aa12.11□□□□□ -0.47
C11orf54-209ENST00000530620 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
C11orf54-209ENST00000530620 HBP1O60381 514 aa12.1□□□□□ -0.47
C11orf54-209ENST00000530620 ATP4AP20648 1035 aa12.1□□□□□ -0.47
C11orf54-209ENST00000530620 ADD1P35611 737 aaKnown RBP12.1□□□□□ -0.47
C11orf54-209ENST00000530620 SARSP49591 514 aaKnown RBP12.1□□□□□ -0.47
C11orf54-209ENST00000530620 RCAN1P53805 252 aa12.1□□□□□ -0.47
C11orf54-209ENST00000530620 NFX1Q12986 1120 aaKnown RBP12.1□□□□□ -0.47
C11orf54-209ENST00000530620 SMAD2Q15796 467 aaKnown RBP12.1□□□□□ -0.47
C11orf54-209ENST00000530620 PFKFB3Q16875 520 aaPredicted RBP12.1□□□□□ -0.47
C11orf54-209ENST00000530620 PDXDC2PQ6P474 469 aa12.1□□□□□ -0.47
C11orf54-209ENST00000530620 KIAA0319LQ8IZA0 1049 aa12.1□□□□□ -0.47
C11orf54-209ENST00000530620 NME8Q8N427 588 aa12.1□□□□□ -0.47
C11orf54-209ENST00000530620 SPPL3Q8TCT6 385 aa12.1□□□□□ -0.47
C11orf54-209ENST00000530620 POF1BQ8WVV4 589 aa12.1□□□□□ -0.47
C11orf54-209ENST00000530620 GLT8D2Q9H1C3 349 aa12.1□□□□□ -0.47
C11orf54-209ENST00000530620 LRFN2Q9ULH4 789 aa12.1□□□□□ -0.47
C11orf54-209ENST00000530620 NID2Q14112 1375 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 ESYT2A0FGR8 921 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 IPO5O00410 1097 aaKnown RBP12.09□□□□□ -0.47
C11orf54-209ENST00000530620 CDC45O75419 566 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 RPS6KA5O75582 802 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 C22orf31O95567 290 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 CYP3A4P08684 503 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 NDUFV1P49821 464 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 METAP2P50579 478 aaKnown RBP eCLIP12.09□□□□□ -0.47
C11orf54-209ENST00000530620 APOBRQ0VD83 1088 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 ADAM15Q13444 863 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 SMAD4Q13485 552 aaKnown RBP12.09□□□□□ -0.47
C11orf54-209ENST00000530620 KRT32Q14532 448 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 NAALADL2Q58DX5 795 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 ZNF484Q5JVG2 852 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 SWSAP1Q6NVH7 229 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 MIS18BP1Q6P0N0 1132 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 REXO1Q8N1G1 1221 aaKnown RBP12.09□□□□□ -0.47
C11orf54-209ENST00000530620 MSLNLQ96KJ4 702 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 ZNF577Q9BSK1 485 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 ZMYND12Q9H0C1 365 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 CD207Q9UJ71 328 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 ARID2Q68CP9 1835 aa12.09□□□□□ -0.47
C11orf54-209ENST00000530620 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 C9IYK1 514 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 GLP2RO95838 553 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 VTNP04004 478 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 NRIP1P48552 1158 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 FGD1P98174 961 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 SETQ01105 290 aaPredicted RBP12.08□□□□□ -0.48
C11orf54-209ENST00000530620 PKN1Q16512 942 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 KIZQ2M2Z5 673 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 TPRNQ4KMQ1 711 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 Q6ZUG5 572 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 CENPQQ7L2Z9 268 aaPredicted RBP12.08□□□□□ -0.48
C11orf54-209ENST00000530620 TRMT1LQ7Z2T5 733 aaKnown RBP12.08□□□□□ -0.48
C11orf54-209ENST00000530620 FAM228AQ86W67 206 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 EFHBQ8N7U6 833 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 RASGRP4Q8TDF6 673 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 BRF1Q92994 677 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 PPP2R3CQ969Q6 453 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 POP1Q99575 1024 aaKnown RBP12.08□□□□□ -0.48
C11orf54-209ENST00000530620 OSMRQ99650 979 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 ADAM2Q99965 735 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 REPIN1Q9BWE0 567 aaKnown RBP12.08□□□□□ -0.48
C11orf54-209ENST00000530620 RGS18Q9NS28 235 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 PLA2G2EQ9NZK7 142 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 CLEC1BQ9P126 229 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 MUTYHQ9UIF7 546 aa12.08□□□□□ -0.48
C11orf54-209ENST00000530620 BARX2Q9UMQ3 279 aaPredicted RBP12.08□□□□□ -0.48
C11orf54-209ENST00000530620 MAFBQ9Y5Q3 323 aaPredicted RBP12.08□□□□□ -0.48
C11orf54-209ENST00000530620 TBKBP1A7MCY6 615 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 PPFIA3O75145 1194 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
C11orf54-209ENST00000530620 SPOUT1Q5T280 376 aaKnown RBP12.07□□□□□ -0.48
C11orf54-209ENST00000530620 FAM102BQ5T8I3 360 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 ZNF746Q6NUN9 644 aaPredicted RBP12.07□□□□□ -0.48
C11orf54-209ENST00000530620 SLC24A5Q71RS6 500 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 RBM23Q86U06 439 aaKnown RBP12.07□□□□□ -0.48
C11orf54-209ENST00000530620 SMRP1Q8NCR6 262 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 PHKBQ93100 1093 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 LENG9Q96B70 501 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 JAKMIP1Q96N16 626 aaKnown RBP12.07□□□□□ -0.48
C11orf54-209ENST00000530620 C6orf50Q9HD87 102 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 C1orf112Q9NSG2 853 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 ST3GAL5Q9UNP4 418 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 PCDHB7Q9Y5E2 793 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 PIEZO1Q92508 2521 aa12.07□□□□□ -0.48
C11orf54-209ENST00000530620 CCDC196A0A1B0GTZ2 297 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 GPR182O15218 404 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 PRPF3O43395 683 aaKnown RBP12.06□□□□□ -0.48
C11orf54-209ENST00000530620 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
C11orf54-209ENST00000530620 GPR32O75388 356 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms