RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 FAM20AQ96MK3 541 aa10.62□□□□□ -0.71
SF3B2-204ENST00000525207 NAP1L4Q99733 375 aaKnown RBP10.62□□□□□ -0.71
SF3B2-204ENST00000525207 NIFKQ9BYG3 293 aaKnown RBP10.62□□□□□ -0.71
SF3B2-204ENST00000525207 TMEM161AQ9NX61 479 aa10.62□□□□□ -0.71
SF3B2-204ENST00000525207 IGKV6-21A0A0C4DH24 114 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 EML1O00423 815 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 TBX3O15119 743 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 CCNT1O60563 726 aaKnown RBP10.61□□□□□ -0.71
SF3B2-204ENST00000525207 JAK2O60674 1132 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 ITGB1P05556 798 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 DARSP14868 501 aaKnown RBP10.61□□□□□ -0.71
SF3B2-204ENST00000525207 IBSPP21815 317 aaPredicted RBP10.61□□□□□ -0.71
SF3B2-204ENST00000525207 EIF4BP23588 611 aaKnown RBP10.61□□□□□ -0.71
SF3B2-204ENST00000525207 PSMC5P62195 406 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 SPIRE1Q08AE8 756 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 CAMK1Q14012 370 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 NAALADL2Q58DX5 795 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 PLA2G4FQ68DD2 849 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 ANO5Q75V66 913 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.61□□□□□ -0.71
SF3B2-204ENST00000525207 NEK9Q8TD19 979 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 HAS1Q92839 578 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 ZNF668Q96K58 619 aaPredicted RBP10.61□□□□□ -0.71
SF3B2-204ENST00000525207 SCLT1Q96NL6 688 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 ELAC1Q9H777 363 aaKnown RBP10.61□□□□□ -0.71
SF3B2-204ENST00000525207 BRMS1Q9HCU9 246 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 WRAP73Q9P2S5 460 aaPredicted RBP10.61□□□□□ -0.71
SF3B2-204ENST00000525207 HCSTQ9UBK5 93 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 PLAGL2Q9UPG8 496 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 PCDHB7Q9Y5E2 793 aa10.61□□□□□ -0.71
SF3B2-204ENST00000525207 TBKBP1A7MCY6 615 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 CSPG5O95196 566 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 SEC24BO95487 1268 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 FGFR1P11362 822 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 QARSP47897 775 aaKnown RBP10.6□□□□□ -0.71
SF3B2-204ENST00000525207 NEK4P51957 841 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 HYAL1Q12794 435 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 FAM102BQ5T8I3 360 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 ZNF410Q86VK4 478 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 KLHL23Q8NBE8 558 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 NLRP7Q8WX94 980 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 SH2D3AQ9BRG2 576 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 LXNQ9BS40 222 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 ALG13Q9NP73 1137 aaKnown RBP10.6□□□□□ -0.71
SF3B2-204ENST00000525207 RNF19AQ9NV58 838 aa10.6□□□□□ -0.71
SF3B2-204ENST00000525207 H3BQ06 376 aaPredicted RBP10.59□□□□□ -0.71
SF3B2-204ENST00000525207 HOXA2O43364 376 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 DKC1O60832 514 aaKnown RBP eCLIP10.59□□□□□ -0.71
SF3B2-204ENST00000525207 TBX10O75333 385 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 MAFO75444 373 aaPredicted RBP10.59□□□□□ -0.71
SF3B2-204ENST00000525207 P4HBP07237 508 aaKnown RBP10.59□□□□□ -0.71
SF3B2-204ENST00000525207 IL9P15248 144 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 ATF7P17544 494 aaPredicted RBP10.59□□□□□ -0.71
SF3B2-204ENST00000525207 FGFR4P22455 802 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 DNAJB1P25685 340 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 FAM189BP81408 668 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 CTC1Q2NKJ3 1217 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 PTCRAQ6ISU1 281 aaPredicted RBP10.59□□□□□ -0.71
SF3B2-204ENST00000525207 ECHDC2Q86YB7 292 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 DIS3L2Q8IYB7 885 aaKnown RBP10.59□□□□□ -0.71
SF3B2-204ENST00000525207 SLFN12Q8IYM2 578 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 LRRC43Q8N309 656 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 SPPL3Q8TCT6 385 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 TMEM117Q9H0C3 514 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 ATP6V0A4Q9HBG4 840 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 CYP26B1Q9NR63 512 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 CLDND1Q9NY35 253 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 PPME1Q9Y570 386 aa10.59□□□□□ -0.71
SF3B2-204ENST00000525207 A0A087WZ62 844 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 DDX11L8A8MPP1 907 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 WNT7AO00755 349 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 NCK2O43639 380 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 ZSCAN20P17040 1043 aaPredicted RBP10.58□□□□□ -0.72
SF3B2-204ENST00000525207 LAG3P18627 525 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 SFPQP23246 707 aaKnown RBP eCLIP10.58□□□□□ -0.72
SF3B2-204ENST00000525207 IRS1P35568 1242 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 LTBRP36941 435 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 DNM2P50570 870 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 FOSBP53539 338 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 CDC42EP1Q00587 391 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 UBE3AQ05086 875 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 EPHA7Q15375 998 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 PUS10Q3MIT2 529 aaKnown RBP10.58□□□□□ -0.72
SF3B2-204ENST00000525207 CLLU1OSQ5K130 101 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 NCAPH2Q6IBW4 605 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 ZNF598Q86UK7 904 aaKnown RBP10.58□□□□□ -0.72
SF3B2-204ENST00000525207 RHPN2Q8IUC4 686 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 FAM178BQ8IXR5 827 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 C4orf19Q8IY42 314 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 COLGALT1Q8NBJ5 622 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 POF1BQ8WVV4 589 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 SLC7A3Q8WY07 619 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 PPP2R3CQ969Q6 453 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 NLRP4Q96MN2 994 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 CASD1Q96PB1 797 aa10.58□□□□□ -0.72
SF3B2-204ENST00000525207 JPH2Q9BR39 696 aaPredicted RBP10.58□□□□□ -0.72
SF3B2-204ENST00000525207 FDXACB1Q9BRP7 624 aaPredicted RBP10.58□□□□□ -0.72
SF3B2-204ENST00000525207 GCOM2Q9BZD3 368 aaPredicted RBP10.58□□□□□ -0.72
SF3B2-204ENST00000525207 DHX33Q9H6R0 707 aaKnown RBP10.58□□□□□ -0.72
SF3B2-204ENST00000525207 CWH43Q9H720 699 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms