RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 CACNA2D4Q7Z3S7 1137 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 CCDC170Q8IYT3 715 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 GOLGA5Q8TBA6 731 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 ACCSQ96QU6 501 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 MKNK1Q9BUB5 465 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 GANQ9H2C0 597 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 PDLIM7Q9NR12 457 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 MCM3APO60318 1980 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 DNAJC25-GNG10A0A024R161 153 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 ATP4AP20648 1035 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 COPB2P35606 906 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 POLR2FP61218 127 aaKnown RBP18.47■□□□□ 0.55
SREK1-212ENST00000522912 TCERG1LQ5VWI1 586 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 GPIHBP1Q8IV16 184 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 SLC9A9Q8IVB4 645 aa18.47■□□□□ 0.55
SREK1-212ENST00000522912 SEPT9Q9UHD8 586 aaPredicted RBP18.47■□□□□ 0.55
SREK1-212ENST00000522912 CYP2C8P10632 490 aa18.46■□□□□ 0.55
SREK1-212ENST00000522912 ACTN1P12814 892 aa18.46■□□□□ 0.55
SREK1-212ENST00000522912 SLC9A1P19634 815 aa18.46■□□□□ 0.55
SREK1-212ENST00000522912 CASQ1P31415 396 aa18.46■□□□□ 0.55
SREK1-212ENST00000522912 CYLC1P35663 651 aaPredicted RBP18.46■□□□□ 0.55
SREK1-212ENST00000522912 BSNDQ8WZ55 320 aa18.46■□□□□ 0.55
SREK1-212ENST00000522912 TMEM206Q9H813 350 aa18.46■□□□□ 0.55
SREK1-212ENST00000522912 XPNPEP1Q9NQW7 623 aa18.46■□□□□ 0.55
SREK1-212ENST00000522912 CYP26B1Q9NR63 512 aa18.46■□□□□ 0.55
SREK1-212ENST00000522912 EIF3CLB5ME19 914 aaKnown RBP18.45■□□□□ 0.54
SREK1-212ENST00000522912 NPTX2P47972 431 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 ERVK-9P63128 1117 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 ARHGAP29Q52LW3 1261 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 XKR3Q5GH77 459 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 EEPD1Q7L9B9 569 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 MMP19Q99542 508 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 EIF3CQ99613 913 aaKnown RBP18.45■□□□□ 0.54
SREK1-212ENST00000522912 ZNF302Q9NR11 478 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 MAFBQ9Y5Q3 323 aaPredicted RBP18.45■□□□□ 0.54
SREK1-212ENST00000522912 IGKV6D-21A0A0A0MT36 114 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 GSTTP1A0A1W2PQM5 241 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 UNCXA6NJT0 531 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 FARP2O94887 1054 aaPredicted RBP18.45■□□□□ 0.54
SREK1-212ENST00000522912 PON1P27169 355 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 MYBPC2Q14324 1141 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 EXOC3L4Q17RC7 722 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 TMEM161BQ8NDZ6 487 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 KIFAP3Q92845 792 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 MS4A4AQ96JQ5 239 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 TRIM10Q9UDY6 481 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 TFR2Q9UP52 801 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 FRMD4BQ9Y2L6 1034 aa18.45■□□□□ 0.54
SREK1-212ENST00000522912 CCDC169A6NNP5 214 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 ZNF263O14978 683 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 KIF5CO60282 957 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 TLR2O60603 784 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 EXOC3O60645 756 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 DGAT1O75907 488 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 EIF4A3P38919 411 aaKnown RBP18.44■□□□□ 0.54
SREK1-212ENST00000522912 KCTD2Q14681 263 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 HGSNATQ68CP4 663 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 TMEM174Q8WUU8 243 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 PCYT2Q99447 389 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 KIFC3Q9BVG8 833 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 PORCNQ9H237 461 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 PCIF1Q9H4Z3 704 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 MROH8Q9H579 483 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 PLCB1Q9NQ66 1216 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 ZNF215Q9UL58 517 aaPredicted RBP18.44■□□□□ 0.54
SREK1-212ENST00000522912 URI1O94763 535 aaPredicted RBP18.44■□□□□ 0.54
SREK1-212ENST00000522912 ARIH2O95376 493 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 KRT83P78385 493 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 MKRN3Q13064 507 aaKnown RBP18.44■□□□□ 0.54
SREK1-212ENST00000522912 LY6KQ17RY6 165 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 MTERF2Q49AM1 385 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 ZNF569Q5MCW4 686 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 WDR78Q5VTH9 848 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 C12orf56Q8IXR9 622 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 SLC17A8Q8NDX2 589 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 SYN2Q92777 582 aaPredicted RBP18.44■□□□□ 0.54
SREK1-212ENST00000522912 CCDC42Q96M95 316 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 CBWD1Q9BRT8 395 aa18.44■□□□□ 0.54
SREK1-212ENST00000522912 RCCD1A6NED2 376 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 TGFB3P10600 412 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 CYP27A1Q02318 531 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 DMP1Q13316 513 aaPredicted RBP18.43■□□□□ 0.54
SREK1-212ENST00000522912 NEDD9Q14511 834 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 KLHDC7AQ5VTJ3 777 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 SFMBT2Q5VUG0 894 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 GBP6Q6ZN66 633 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 RDH13Q8NBN7 331 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 ZSWIM2Q8NEG5 633 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 MCPH1Q8NEM0 835 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 SPIRE2Q8WWL2 714 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 NTPCRQ9BSD7 190 aaKnown RBP18.43■□□□□ 0.54
SREK1-212ENST00000522912 NUCKS1Q9H1E3 243 aaKnown RBP18.43■□□□□ 0.54
SREK1-212ENST00000522912 EFCC1Q9HA90 598 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 SIX2Q9NPC8 291 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 KMT5AQ9NQR1 393 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 CGNQ9P2M7 1197 aaKnown RBP18.43■□□□□ 0.54
SREK1-212ENST00000522912 TBX20Q9UMR3 447 aa18.43■□□□□ 0.54
SREK1-212ENST00000522912 GTPBP10A4D1E9 387 aaKnown RBP18.42■□□□□ 0.54
SREK1-212ENST00000522912 SLU7O95391 586 aaKnown RBP18.42■□□□□ 0.54
SREK1-212ENST00000522912 GGPS1O95749 300 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms