RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 GPBP1L1Q9HC44 474 aaPredicted RBP20.01■□□□□ 0.79
SDC2-202ENST00000518385 JADE2Q9NQC1 790 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 HOMER2Q9NSB8 354 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 RNF146Q9NTX7 359 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 COL4A3BPQ9Y5P4 624 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 AGPSO00116 658 aa20■□□□□ 0.79
SDC2-202ENST00000518385 EIF3HO15372 352 aaKnown RBP eCLIP20■□□□□ 0.792e-10■■■□□ 16.5
SDC2-202ENST00000518385 PHACTR2O75167 634 aa20■□□□□ 0.79
SDC2-202ENST00000518385 ZBTB48P10074 688 aaPredicted RBP20■□□□□ 0.79
SDC2-202ENST00000518385 OSBPP22059 807 aa20■□□□□ 0.79
SDC2-202ENST00000518385 MAN2A1Q16706 1144 aa20■□□□□ 0.79
SDC2-202ENST00000518385 EDRF1Q3B7T1 1238 aa20■□□□□ 0.79
SDC2-202ENST00000518385 SPRYD7Q5W111 196 aa20■□□□□ 0.79
SDC2-202ENST00000518385 CREG2Q8IUH2 290 aa20■□□□□ 0.79
SDC2-202ENST00000518385 MREGQ8N565 214 aa20■□□□□ 0.79
SDC2-202ENST00000518385 SYN2Q92777 582 aaPredicted RBP20■□□□□ 0.79
SDC2-202ENST00000518385 PAGR1Q9BTK6 254 aa20■□□□□ 0.79
SDC2-202ENST00000518385 TBC1D22BQ9NU19 505 aa20■□□□□ 0.79
SDC2-202ENST00000518385 HDAC6Q9UBN7 1215 aa20■□□□□ 0.79
SDC2-202ENST00000518385 GGA2Q9UJY4 613 aa20■□□□□ 0.79
SDC2-202ENST00000518385 GRID2IPA4D2P6 1211 aa20■□□□□ 0.79
SDC2-202ENST00000518385 B4DLN1 442 aa20■□□□□ 0.79
SDC2-202ENST00000518385 ENC1O14682 589 aa20■□□□□ 0.79
SDC2-202ENST00000518385 ARP10275 920 aa20■□□□□ 0.79
SDC2-202ENST00000518385 IRAK1P51617 712 aa20■□□□□ 0.79
SDC2-202ENST00000518385 PSMC6P62333 389 aa20■□□□□ 0.79
SDC2-202ENST00000518385 MAPK8IP2Q13387 824 aaPredicted RBP20■□□□□ 0.79
SDC2-202ENST00000518385 RNF207Q6ZRF8 634 aa20■□□□□ 0.79
SDC2-202ENST00000518385 MICALCLQ6ZW33 695 aa20■□□□□ 0.79
SDC2-202ENST00000518385 CD302Q8IX05 232 aa20■□□□□ 0.79
SDC2-202ENST00000518385 ZC3H3Q8IXZ2 948 aaKnown RBP20■□□□□ 0.79
SDC2-202ENST00000518385 IFIH1Q9BYX4 1025 aaKnown RBP20■□□□□ 0.79
SDC2-202ENST00000518385 DEF6Q9H4E7 631 aa20■□□□□ 0.79
SDC2-202ENST00000518385 BTBD7Q9P203 1132 aa20■□□□□ 0.79
SDC2-202ENST00000518385 SEL1LQ9UBV2 794 aa20■□□□□ 0.79
SDC2-202ENST00000518385 TRIM10Q9UDY6 481 aa20■□□□□ 0.79
SDC2-202ENST00000518385 LOXHD1Q8IVV2 1947 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 PASKQ96RG2 1323 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 PES1O00541 588 aaKnown RBP19.99■□□□□ 0.79
SDC2-202ENST00000518385 ITGB5P18084 799 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 MARSP56192 900 aaKnown RBP19.99■□□□□ 0.79
SDC2-202ENST00000518385 HUNKP57058 714 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 VWA3BQ502W6 1294 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 SWT1Q5T5J6 900 aaKnown RBP19.99■□□□□ 0.79
SDC2-202ENST00000518385 CCDC181Q5TID7 509 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 MMS22LQ6ZRQ5 1243 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 LRRC55Q6ZSA7 311 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 IFT20Q8IY31 132 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 SPATA4Q8NEY3 305 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 DYDC2Q96IM9 177 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 UIMC1Q96RL1 719 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 BHMT2Q9H2M3 363 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 OLFML3Q9NRN5 406 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 KCNH7Q9NS40 1196 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 COL20A1Q9P218 1284 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 STIM2Q9P246 746 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 SLC45A1Q9Y2W3 748 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 PCDHA13Q9Y5I0 950 aa19.99■□□□□ 0.79
SDC2-202ENST00000518385 CES2O00748 559 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 KIF3CO14782 793 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 MAFGO15525 162 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 TBCAO75347 108 aaKnown RBP19.98■□□□□ 0.79
SDC2-202ENST00000518385 RPS6P62753 249 aaKnown RBP19.98■□□□□ 0.79
SDC2-202ENST00000518385 UBXN2AP68543 259 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 PLS1Q14651 629 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 BMT2Q1RMZ1 405 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 MIIPQ5JXC2 388 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 TPH2Q8IWU9 490 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 PCMTD1Q96MG8 357 aaPredicted RBP19.98■□□□□ 0.79
SDC2-202ENST00000518385 CEP89Q96ST8 783 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 REEP2Q9BRK0 252 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 LACRTQ9GZZ8 138 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 UNC45AQ9H3U1 944 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 RGL1Q9NZL6 768 aa19.98■□□□□ 0.79
SDC2-202ENST00000518385 ATP8B3O60423 1300 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 A0A0G2JMZ2 1700 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 CYP4A11Q02928 519 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 LRRC41Q15345 812 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 RINT1Q6NUQ1 792 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 EPM2AIP1Q7L775 607 aaPredicted RBP19.97■□□□□ 0.79
SDC2-202ENST00000518385 RIOX2Q8IUF8 465 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 CHST13Q8NET6 341 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 SCFD1Q8WVM8 642 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 CAPZA3Q96KX2 299 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 OSBPL9Q96SU4 736 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 KCTD10Q9H3F6 313 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 NDST4Q9H3R1 872 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 ACAD9Q9H845 621 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 AGO4Q9HCK5 861 aaKnown RBP19.97■□□□□ 0.79
SDC2-202ENST00000518385 AGPAT5Q9NUQ2 364 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 ODF2LQ9ULJ1 636 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 TRAF3IP3Q9Y228 551 aa19.97■□□□□ 0.79
SDC2-202ENST00000518385 CCL15-CCL14A0A0B4J2E2 113 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 RASSF10A6NK89 507 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 RBAK-RBAKDNI3L0D1 243 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 PDXKO00764 312 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 CNMDO75829 334 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 LYPLA2O95372 231 aa19.96■□□□□ 0.79
SDC2-202ENST00000518385 P4HBP07237 508 aaKnown RBP19.96■□□□□ 0.79
SDC2-202ENST00000518385 GUCY2CP25092 1073 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms