RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 GALCP54803 685 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 RNASE9P60153 205 aaKnown RBP7.25□□□□□ -1.25
CDH12-203ENST00000517378 PTENP60484 403 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 KLRC3Q07444 240 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 DRP2Q13474 957 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 MYBPC2Q14324 1141 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 HLTFQ14527 1009 aaKnown RBP eCLIP7.25□□□□□ -1.25
CDH12-203ENST00000517378 KIF22Q14807 665 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 PLCB4Q15147 1175 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 FAM182BQ5T319 152 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 C6orf89Q6UWU4 347 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 DAAM2Q86T65 1068 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 NLRP14Q86W24 1093 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 FAM186BQ8IYM0 893 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 ATP8B4Q8TF62 1192 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 STRA6Q9BX79 667 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 AP1M1Q9BXS5 423 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 ODF2LQ9ULJ1 636 aa7.25□□□□□ -1.25
CDH12-203ENST00000517378 SPATA31A6Q5VVP1 1343 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 C5orf60A6NFR6 353 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 PPP1R12BO60237 982 aaPredicted RBP7.24□□□□□ -1.25
CDH12-203ENST00000517378 BUB1BO60566 1050 aaPredicted RBP7.24□□□□□ -1.25
CDH12-203ENST00000517378 TOM1O60784 492 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 ITGA4P13612 1032 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 NPR1P16066 1061 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 CTNNA1P35221 906 aaKnown RBP7.24□□□□□ -1.25
CDH12-203ENST00000517378 LIG3P49916 1009 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 KCNA1Q09470 495 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 SHROOM1Q2M3G4 852 aaPredicted RBP7.24□□□□□ -1.25
CDH12-203ENST00000517378 DCAF12L1Q5VU92 463 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 TCERG1LQ5VWI1 586 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 GJB7Q6PEY0 223 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 OTOP1Q7RTM1 612 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 MICALL1Q8N3F8 863 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 SLC5A5Q92911 643 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 CCT8L2Q96SF2 557 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 DDX47Q9H0S4 455 aaKnown RBP7.24□□□□□ -1.25
CDH12-203ENST00000517378 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.24□□□□□ -1.25
CDH12-203ENST00000517378 AMFRQ9UKV5 643 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 SAMM50Q9Y512 469 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 TMCO5BA8MYB1 307 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 TRAPPC3O43617 180 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 SLITRK3O94933 977 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 TRIM37O94972 964 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 CCDC172P0C7W6 258 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 EIF3BP55884 814 aaKnown RBP7.24□□□□□ -1.25
CDH12-203ENST00000517378 MCCD1P59942 119 aaPredicted RBP7.24□□□□□ -1.25
CDH12-203ENST00000517378 CYP4A11Q02928 519 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 TRAF1Q13077 416 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 PLS1Q14651 629 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 B3GNT9Q6UX72 402 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 STXBP4Q6ZWJ1 553 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 ARMC9Q7Z3E5 817 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 PODNQ7Z5L7 613 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 DDX42Q86XP3 938 aaKnown RBP eCLIP7.24□□□□□ -1.25
CDH12-203ENST00000517378 SLC35G2Q8TBE7 412 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 U2AF1L4Q8WU68 220 aaKnown RBP7.24□□□□□ -1.25
CDH12-203ENST00000517378 UIMC1Q96RL1 719 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 NAP1L3Q99457 506 aaPredicted RBP7.24□□□□□ -1.25
CDH12-203ENST00000517378 WDR18Q9BV38 432 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 RAB17Q9H0T7 212 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 PARVGQ9HBI0 331 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 KCNQ5Q9NR82 932 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 APEX2Q9UBZ4 518 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 AMACRQ9UHK6 382 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 UTP11Q9Y3A2 253 aaKnown RBP7.24□□□□□ -1.25
CDH12-203ENST00000517378 IGSF9BQ9UPX0 1349 aa7.24□□□□□ -1.25
CDH12-203ENST00000517378 FAM187AA6NFU0 413 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 VGLL3A8MV65 326 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 TTI1O43156 1089 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 DAPK3O43293 454 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 KIAA0754O94854 1291 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 FAM13AO94988 1023 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 NUDT17P0C025 328 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 SLURP2P0DP57 97 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 BMP3P12645 472 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 GUCY2CP25092 1073 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 POLD1P28340 1107 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 FLT3P36888 993 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 DRG2P55039 364 aaKnown RBP7.23□□□□□ -1.25
CDH12-203ENST00000517378 DRAP1Q14919 205 aaPredicted RBP7.23□□□□□ -1.25
CDH12-203ENST00000517378 SWT1Q5T5J6 900 aaKnown RBP7.23□□□□□ -1.25
CDH12-203ENST00000517378 DUPD1Q68J44 220 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 C11orf63Q6NUN7 778 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 ZNF720Q7Z2F6 126 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 DNAAF5Q86Y56 855 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 GLYCTKQ8IVS8 523 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 LMO3Q8TAP4 145 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 VTI1AQ96AJ9 217 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 TLCD1Q96CP7 247 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 CYFIP2Q96F07 1278 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 INTS2Q9H0H0 1204 aaKnown RBP7.23□□□□□ -1.25
CDH12-203ENST00000517378 OSGEPQ9NPF4 335 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 AGPAT3Q9NRZ7 376 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 ZDHHC18Q9NUE0 388 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 RGL1Q9NZL6 768 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 DNAJC12Q9UKB3 198 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 USP20Q9Y2K6 914 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 PCDHB13Q9Y5F0 798 aa7.23□□□□□ -1.25
CDH12-203ENST00000517378 ANKRD62A6NC57 917 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms