RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 WDR18Q9BV38 432 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 XPO4Q9C0E2 1151 aaKnown RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 NRSN2Q9GZP1 204 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 NUCKS1Q9H1E3 243 aaKnown RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 ZMAT4Q9H898 229 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 ARGLU1Q9NWB6 273 aaPredicted RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 CFDP1Q9UEE9 299 aaPredicted RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 STAP2Q9UGK3 403 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 MSRAQ9UJ68 235 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 OGDHLQ9ULD0 1010 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 SLC39A10Q9ULF5 831 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 LIMCH1Q9UPQ0 1083 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 ST14Q9Y5Y6 855 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 CLSPNQ9HAW4 1339 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 GOLGA6L3A6NEY3 463 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 PGPEP1LA6NFU8 196 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 C2orf71A6NGG8 1288 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 GOLGA6L6A8MZA4 724 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 C19orf81C9J6K1 198 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 F8W8V4 182 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 LINC01387J3KSC0 135 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 MASP2O00187 686 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 IPO5O00410 1097 aaKnown RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 TRIM38O00635 465 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 WNT9AO14904 365 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 NPC1O15118 1278 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 USO1O60763 962 aaKnown RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 STARD3NLO95772 234 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 GSNP06396 782 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 PLS3P13797 630 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 PDE6AP16499 860 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 MX2P20592 715 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 PSMA3P25788 255 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 CD40P25942 277 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 EEF1GP26641 437 aaKnown RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 COPAP53621 1224 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 SLC5A3P53794 718 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 JAM2P57087 298 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 PIP4K2BP78356 416 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 POU4F1Q01851 419 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 NRG1Q02297 640 aaPredicted RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 ID3Q02535 119 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 CREMQ03060 361 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 DUSP4Q13115 394 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 TRPC3Q13507 836 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 SNW1Q13573 536 aaKnown RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 DAG1Q14118 895 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 UBAP2LQ14157 1087 aaKnown RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 SMC1AQ14683 1233 aaKnown RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 SMAD1Q15797 465 aaKnown RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 SLC35G1Q2M3R5 365 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 FBXO47Q5MNV8 452 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 SLC10A5Q5PT55 438 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 CIAPIN1Q6FI81 312 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 CCDC62Q6P9F0 684 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 UBE3DQ7Z6J8 389 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 SYT9Q86SS6 491 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 GALNT13Q8IUC8 556 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 FTSJ3Q8IY81 847 aaKnown RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 OXR1Q8N573 874 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 IL22RA1Q8N6P7 574 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 MARCH10Q8NA82 808 aaPredicted RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 MSANTD4Q8NCY6 345 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 RCBTB1Q8NDN9 531 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 PLBD2Q8NHP8 589 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 RTF1Q92541 710 aaKnown RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 HTRA1Q92743 480 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 SNX21Q969T3 373 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 C18orf8Q96DM3 657 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 VWCEQ96DN2 955 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 CHAMP1Q96JM3 812 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 HEPHQ9BQS7 1158 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 PYM1Q9BRP8 204 aaKnown RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 GHITMQ9H3K2 345 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 ZMAT3Q9HA38 289 aaKnown RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 PREBQ9HCU5 417 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 ATP8A2Q9NTI2 1148 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 HAUS2Q9NVX0 235 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 CLEC1BQ9P126 229 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 ORC3Q9UBD5 711 aaPredicted RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 FEZ2Q9UHY8 353 aaPredicted RBP4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 PCDHGC5Q9Y5F6 944 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 PCDHA2Q9Y5H9 948 aa4.51□□□□□ -1.69
RNU4-60P-201ENST00000517239 A0A088AWK7 358 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 F5H0A9 414 aaPredicted RBP4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 H0Y8X5 98 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 ACKR2O00590 384 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 CAPN5O15484 640 aaPredicted RBP4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 HTRA2O43464 458 aaPredicted RBP4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 FSBPO95073 299 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 FTLP02792 175 aaPredicted RBP4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 LPLP06858 475 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 CD3EP07766 207 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 MTHFD2P13995 350 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 HNRNPLP14866 589 aaKnown RBP eCLIP4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 MUTP22033 750 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 EDNRBP24530 442 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 SERPINF1P36955 418 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 AFMP43652 599 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 MAP2K6P52564 334 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms