RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MEOX1P50221 254 aa5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 IL2P60568 153 aa5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 USP10Q14694 798 aaKnown RBP5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 STILQ15468 1287 aa5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 ARHGEF18Q6ZSZ5 1173 aa5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 CHAC2Q8WUX2 184 aa5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 ZCCHC14Q8WYQ9 949 aaKnown RBP5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 ERCC4Q92889 916 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 AJUBAQ96IF1 538 aa5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 SYT3Q9BQG1 590 aa5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 MSL2Q9HCI7 577 aa5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 RBPJLQ9UBG7 517 aa5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 KIF21BO75037 1637 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 A0A0G2JNJ9 132 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 ZEB2O60315 1214 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 KLHL18O94889 574 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 KIF20AO95235 890 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 ETV4P43268 484 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 RGS3P49796 1198 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 BCAR1P56945 870 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 ALDH6A1Q02252 535 aaKnown RBP5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 FAPQ12884 760 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 DHCR24Q15392 516 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 CATSPEREQ5SY80 951 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 CC2D1BQ5T0F9 858 aaKnown RBP5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 RNF187Q5TA31 235 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 GRAMD4Q6IC98 578 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 ZNF662Q6ZS27 426 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 LEO1Q8WVC0 666 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 LPPQ93052 612 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 MAML3Q96JK9 1138 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 TUBGCP5Q96RT8 1024 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 TTC1Q99614 292 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 KATNBL1Q9H079 304 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 JADE2Q9NQC1 790 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 TOMM22Q9NS69 142 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 Q9UFV3 132 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 WASF3Q9UPY6 502 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 HDAC5Q9UQL6 1122 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 CLIP1P30622 1438 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 NUP160Q12769 1436 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 ZNF536O15090 1300 aa5.74□□□□□ -1.49
HMGB3P13-201ENST00000511263 BRINP1O60477 761 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 IL18BPO95998 194 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 HMGCRP04035 888 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 LSP1P33241 339 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 CNR2P34972 360 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 LSSP48449 732 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 DSG1Q02413 1049 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 SLC20A2Q08357 652 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 LRRC32Q14392 662 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 GPR158Q5T848 1215 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 KBTBD2Q8IY47 623 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 RTKN2Q8IZC4 609 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 GPATCH11Q8N954 259 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 OXSMQ9NWU1 459 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 THG1LQ9NWX6 298 aaKnown RBP5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 VWA7Q9Y334 891 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 DUSP10Q9Y6W6 482 aa5.73□□□□□ -1.49
HMGB3P13-201ENST00000511263 CUL7Q14999 1698 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 GRIN2AQ12879 1464 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 ST20-MTHFSA0A0A6YYL1 179 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 PLEKHD1A6NEE1 506 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 GSG1L2A8MUP6 293 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 K7ESM1 405 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 LAMTOR5O43504 91 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 ULK1O75385 1050 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 COL6A1P12109 1028 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 ATP2A2P16615 1042 aaKnown RBP5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 SLC9A1P19634 815 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 MC4RP32245 332 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 ANAPC15P60006 121 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 PPP2CBP62714 309 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 PPP2CAP67775 309 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 IL13RA1P78552 427 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 TOP3AQ13472 1001 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 SEC23AQ15436 765 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 SLFN12LQ6IEE8 588 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 GLB1LQ6UWU2 654 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 SMC1BQ8NDV3 1235 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 NUDT10Q8NFP7 164 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 NUDT11Q96G61 164 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 GPR20Q99678 358 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 ZDHHC5Q9C0B5 715 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 MTFR1LQ9H019 292 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 IFT22Q9H7X7 185 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 YY1AP1Q9H869 796 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 SAE1Q9UBE0 346 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 APOBEC2Q9Y235 224 aaKnown RBP5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 MYRFQ9Y2G1 1151 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 ABCA5Q8WWZ7 1642 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 FMN1Q68DA7 1419 aa5.72□□□□□ -1.49
HMGB3P13-201ENST00000511263 SNAPC4Q5SXM2 1469 aa5.71□□□□□ -1.49
HMGB3P13-201ENST00000511263 A0A087X0B3 334 aa5.71□□□□□ -1.5
HMGB3P13-201ENST00000511263 B4GALT4O60513 344 aa5.71□□□□□ -1.5
HMGB3P13-201ENST00000511263 H2AFYO75367 372 aaKnown RBP5.71□□□□□ -1.5
HMGB3P13-201ENST00000511263 FKBP9O95302 570 aa5.71□□□□□ -1.5
HMGB3P13-201ENST00000511263 PLATP00750 562 aa5.71□□□□□ -1.5
HMGB3P13-201ENST00000511263 PRLP01236 227 aa5.71□□□□□ -1.5
HMGB3P13-201ENST00000511263 CNGA1P29973 690 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms