RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 FGD2Q7Z6J4 655 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 NIM1KQ8IY84 436 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 IFNL3Q8IZI9 196 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 GSTCDQ8NEC7 633 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 RABGGTAQ92696 567 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 BBC3Q96PG8 261 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 TOR3AQ9H497 397 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 RIOX1Q9H6W3 641 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 TRIM39Q9HCM9 518 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 INCENPQ9NQS7 918 aa3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 SETD1BQ9UPS6 1966 aaKnown RBP3.48□□□□□ -1.85
HMGB1P35-201ENST00000503360 A0A0G2JNJ9 132 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 FAM47E-STBD1D6RA91 191 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 PROB1E7EW31 1015 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 WNT9AO14904 365 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 NKRFO15226 690 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 KCNQ2O43526 872 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 MSCO60682 206 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 RASGRP1O95267 797 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 CRTAMO95727 393 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 APPP05067 770 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 MYCLP1P12525 358 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 NCLP19338 710 aaKnown RBP3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 AOAHP28039 575 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 MASP1P48740 699 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 MAN2A2P49641 1150 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 MRE11P49959 708 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 MEOX1P50221 254 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 GPR85P60893 370 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 HERVK_113P62684 666 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 IL13RA1P78552 427 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 GUCY1A3Q02108 690 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 TM4SF20Q53R12 229 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 CNNM4Q6P4Q7 775 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 FILIP1Q7Z7B0 1213 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 MTDHQ86UE4 582 aaKnown RBP3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 RBM12BQ8IXT5 1001 aaKnown RBP3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 MFSD3Q96ES6 412 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 SCLYQ96I15 445 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 MAGEB10Q96LZ2 347 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 KIAA1683Q9H0B3 1180 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 SPC25Q9HBM1 224 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 SLC39A2Q9NP94 309 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 IFT57Q9NWB7 429 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 Q9UFV3 132 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 FZD1Q9UP38 647 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 PRKAB1Q9Y478 270 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 PCDHA9Q9Y5H5 950 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 PCDHA8Q9Y5H6 950 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 COX11Q9Y6N1 276 aa3.47□□□□□ -1.85
HMGB1P35-201ENST00000503360 OPA1O60313 960 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 DNAJC6O75061 913 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 DNAJC8O75937 253 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 COL6A2P12110 1019 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 NAT1P18440 290 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 PTGS1P23219 599 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 KCNQ1P51787 676 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 RIN1Q13671 783 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 CNGB1Q14028 1251 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 KANK2Q63ZY3 851 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 BHLHA9Q7RTU4 235 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 LRRTM3Q86VH5 581 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 ADGRG3Q86Y34 549 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 SLC25A43Q8WUT9 341 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 ALG1Q9BT22 464 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 NRDE2Q9H7Z3 1164 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 AGO3Q9H9G7 860 aaKnown RBP3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 INTS7Q9NVH2 962 aaKnown RBP3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 ARHGAP28Q9P2N2 729 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 MAGEC2Q9UBF1 373 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 PPARGC1AQ9UBK2 798 aaKnown RBP3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 SRPK3Q9UPE1 567 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 SH3BP1Q9Y3L3 701 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 TNPO3Q9Y5L0 923 aaKnown RBP3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 COL4A3Q01955 1670 aa3.46□□□□□ -1.86
HMGB1P35-201ENST00000503360 XDHP47989 1333 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 A0A087X0B3 334 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 TCRBV16S1A1N1A0A5B0 115 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 PDE8AO60658 829 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 ASLP04424 464 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 ERBB2P04626 1255 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 SRGAP2CP0DJJ0 459 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 PDE6AP16499 860 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 PTPN1P18031 435 aaKnown RBP3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 SCNN1GP51170 649 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 SESN2P58004 480 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 SMAD3P84022 425 aaKnown RBP3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 FSTL1Q12841 308 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 PAK1Q13153 545 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 ZNF460Q14592 562 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 FIGNQ5HY92 759 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 LY6G5CQ5SRR4 150 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 STRIP1Q5VSL9 837 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 PAPD7Q5XG87 772 aaKnown RBP3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 BTBD8Q5XKL5 378 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 MICALCLQ6ZW33 695 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 ZC3H7AQ8IWR0 971 aaKnown RBP3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 RTKN2Q8IZC4 609 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 TARS2Q9BW92 718 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms