RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 DUSP12Q9UNI6 340 aa17.77■□□□□ 0.44
HDAC6-236ENST00000498808 WDR87Q6ZQQ6 2873 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 CEP250Q9BV73 2442 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 IGHDP01880 384 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 CLCN3P51790 818 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 BCAR1P56945 870 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 TYW1BQ6NUM6 668 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 SWSAP1Q6NVH7 229 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 DGLUCYQ7Z3D6 616 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 HEATR3Q7Z4Q2 680 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 ZNF598Q86UK7 904 aaKnown RBP17.76■□□□□ 0.43
HDAC6-236ENST00000498808 RAB11FIP4Q86YS3 637 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 SIX5Q8N196 739 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 CCDC82Q8N4S0 544 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 METTL13Q8N6R0 699 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 HELQQ8TDG4 1101 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 TMEM169Q96HH4 297 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 IRAK3Q9Y616 596 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 C2orf16Q68DN1 1984 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 OTOGLQ3ZCN5 2332 aa17.76■□□□□ 0.43
HDAC6-236ENST00000498808 MYH9P35579 1960 aaKnown RBP17.75■□□□□ 0.43
HDAC6-236ENST00000498808 DHX15O43143 795 aaKnown RBP17.75■□□□□ 0.43
HDAC6-236ENST00000498808 LMNAP02545 664 aaKnown RBP17.75■□□□□ 0.43
HDAC6-236ENST00000498808 ZSCAN20P17040 1043 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-236ENST00000498808 NLRP11P59045 1033 aaKnown RBP17.75■□□□□ 0.43
HDAC6-236ENST00000498808 COL9A3Q14050 684 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-236ENST00000498808 KIAA2013Q8IYS2 634 aa17.75■□□□□ 0.43
HDAC6-236ENST00000498808 LINC01465Q8N7H1 131 aa17.75■□□□□ 0.43
HDAC6-236ENST00000498808 KCNG4Q8TDN1 519 aa17.75■□□□□ 0.43
HDAC6-236ENST00000498808 ACSF2Q96CM8 615 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-236ENST00000498808 ANO3Q9BYT9 981 aa17.75■□□□□ 0.43
HDAC6-236ENST00000498808 ADAMTS10Q9H324 1103 aa17.75■□□□□ 0.43
HDAC6-236ENST00000498808 KCNK12Q9HB15 430 aa17.75■□□□□ 0.43
HDAC6-236ENST00000498808 FBXL21Q9UKT6 434 aa17.75■□□□□ 0.43
HDAC6-236ENST00000498808 A0A0U1RQF3 1178 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 SH2B2O14492 632 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-236ENST00000498808 CTSAP10619 480 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 GSPT1P15170 499 aaKnown RBP17.74■□□□□ 0.43
HDAC6-236ENST00000498808 ALDH7A1P49419 539 aaKnown RBP17.74■□□□□ 0.43
HDAC6-236ENST00000498808 BMS1Q14692 1282 aaKnown RBP17.74■□□□□ 0.43
HDAC6-236ENST00000498808 WWC2Q6AWC2 1192 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 MIS18BP1Q6P0N0 1132 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 CCDC149Q6ZUS6 474 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 OTOP3Q7RTS5 596 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 TRMT1LQ7Z2T5 733 aaKnown RBP17.74■□□□□ 0.43
HDAC6-236ENST00000498808 GPR149Q86SP6 731 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 CABP7Q86V35 215 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 CKAP2LQ8IYA6 745 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 BCL7CQ8WUZ0 217 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-236ENST00000498808 BBXQ8WY36 941 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-236ENST00000498808 ZNF668Q96K58 619 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-236ENST00000498808 MRPL9Q9BYD2 267 aaKnown RBP17.74■□□□□ 0.43
HDAC6-236ENST00000498808 SEMA4AQ9H3S1 761 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 RWDD1Q9H446 243 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-236ENST00000498808 R4GN57 208 aa17.74■□□□□ 0.43
HDAC6-236ENST00000498808 PRC1O43663 620 aa17.73■□□□□ 0.43
HDAC6-236ENST00000498808 NARSO43776 548 aaKnown RBP17.73■□□□□ 0.43
HDAC6-236ENST00000498808 EIF4BP23588 611 aaKnown RBP17.73■□□□□ 0.43
HDAC6-236ENST00000498808 SREBF1P36956 1147 aa17.73■□□□□ 0.43
HDAC6-236ENST00000498808 CASC1Q6TDU7 716 aa17.73■□□□□ 0.43
HDAC6-236ENST00000498808 NFXL1Q6ZNB6 911 aa17.73■□□□□ 0.43
HDAC6-236ENST00000498808 MTA3Q9BTC8 594 aa17.73■□□□□ 0.43
HDAC6-236ENST00000498808 SFXN1Q9H9B4 322 aa17.73■□□□□ 0.43
HDAC6-236ENST00000498808 RIC8AQ9NPQ8 531 aa17.73■□□□□ 0.43
HDAC6-236ENST00000498808 AKT3Q9Y243 479 aa17.73■□□□□ 0.43
HDAC6-236ENST00000498808 MAFBQ9Y5Q3 323 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-236ENST00000498808 EPG5Q9HCE0 2579 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 TPRP12270 2363 aaKnown RBP17.72■□□□□ 0.43
HDAC6-236ENST00000498808 KRBA1A5PL33 1030 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 CCDC69A6NI79 296 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 FAM86B1E9PN63 330 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 ZC3H11AO75152 810 aaKnown RBP eCLIP17.72■□□□□ 0.43
HDAC6-236ENST00000498808 FAM86B2P0C5J1 330 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 FGFR4P22455 802 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 POLGP54098 1239 aaPredicted RBP17.72■□□□□ 0.43
HDAC6-236ENST00000498808 GIT2Q14161 759 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 NIPA1Q7RTP0 329 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 DDX53Q86TM3 631 aaKnown RBP17.72■□□□□ 0.43
HDAC6-236ENST00000498808 LRRC71Q8N4P6 559 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 TMEM87AQ8NBN3 555 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 IGSF21Q96ID5 467 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 FANCMQ8IYD8 2048 aa17.72■□□□□ 0.43
HDAC6-236ENST00000498808 WDR81Q562E7 1941 aa17.71■□□□□ 0.43
HDAC6-236ENST00000498808 MAGEB2O15479 319 aa17.71■□□□□ 0.43
HDAC6-236ENST00000498808 N4BP1O75113 896 aaKnown RBP17.71■□□□□ 0.43
HDAC6-236ENST00000498808 FOSP01100 380 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-236ENST00000498808 DARSP14868 501 aaKnown RBP17.71■□□□□ 0.43
HDAC6-236ENST00000498808 CHMLP26374 656 aa17.71■□□□□ 0.43
HDAC6-236ENST00000498808 NAPAP54920 295 aa17.71■□□□□ 0.43
HDAC6-236ENST00000498808 PUM1Q14671 1186 aaKnown RBP eCLIP17.71■□□□□ 0.43
HDAC6-236ENST00000498808 PTPN14Q15678 1187 aa17.71■□□□□ 0.43
HDAC6-236ENST00000498808 EFCAB12Q6NXP0 572 aa17.71■□□□□ 0.43
HDAC6-236ENST00000498808 PLA2G4DQ86XP0 818 aa17.71■□□□□ 0.43
HDAC6-236ENST00000498808 TMTC2Q8N394 836 aa17.71■□□□□ 0.43
HDAC6-236ENST00000498808 RUFY2Q8WXA3 655 aa17.71■□□□□ 0.43
HDAC6-236ENST00000498808 RIN2Q8WYP3 895 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-236ENST00000498808 MAP7D2Q96T17 732 aa17.71■□□□□ 0.43
HDAC6-236ENST00000498808 VN1R3Q9BXE9 311 aa17.71■□□□□ 0.43
HDAC6-236ENST00000498808 CNTNAP5Q8WYK1 1306 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms