RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ZBTB39O15060 712 aa15.72■□□□□ 0.11
VTI1A-206ENST00000489142 TBX3O15119 743 aa15.72■□□□□ 0.11
VTI1A-206ENST00000489142 FGFR1P11362 822 aa15.72■□□□□ 0.11
VTI1A-206ENST00000489142 EIF4BP23588 611 aaKnown RBP15.72■□□□□ 0.11
VTI1A-206ENST00000489142 SPIRE1Q08AE8 756 aa15.72■□□□□ 0.11
VTI1A-206ENST00000489142 DSC3Q14574 896 aa15.72■□□□□ 0.11
VTI1A-206ENST00000489142 PTPROQ16827 1216 aa15.72■□□□□ 0.11
VTI1A-206ENST00000489142 CMTR2Q8IYT2 770 aaKnown RBP15.72■□□□□ 0.11
VTI1A-206ENST00000489142 CLP1Q92989 425 aaKnown RBP15.72■□□□□ 0.11
VTI1A-206ENST00000489142 LXNQ9BS40 222 aa15.72■□□□□ 0.11
VTI1A-206ENST00000489142 ALG13Q9NP73 1137 aaKnown RBP15.72■□□□□ 0.11
VTI1A-206ENST00000489142 CYP26B1Q9NR63 512 aa15.72■□□□□ 0.11
VTI1A-206ENST00000489142 TTC28Q96AY4 2481 aa15.72■□□□□ 0.11
VTI1A-206ENST00000489142 BAG4O95429 457 aaKnown RBP15.71■□□□□ 0.11
VTI1A-206ENST00000489142 P4HBP07237 508 aaKnown RBP15.71■□□□□ 0.11
VTI1A-206ENST00000489142 DARSP14868 501 aaKnown RBP15.71■□□□□ 0.11
VTI1A-206ENST00000489142 CALCRLQ16602 461 aa15.71■□□□□ 0.11
VTI1A-206ENST00000489142 TCEAL5Q5H9L2 206 aa15.71■□□□□ 0.11
VTI1A-206ENST00000489142 ODR4Q5SWX8 454 aa15.71■□□□□ 0.11
VTI1A-206ENST00000489142 SLC24A5Q71RS6 500 aa15.71■□□□□ 0.11
VTI1A-206ENST00000489142 RHPN2Q8IUC4 686 aa15.71■□□□□ 0.11
VTI1A-206ENST00000489142 RNF169Q8NCN4 708 aa15.71■□□□□ 0.11
VTI1A-206ENST00000489142 C8orf76Q96K31 380 aa15.71■□□□□ 0.11
VTI1A-206ENST00000489142 CEP170P1Q96L14 293 aa15.71■□□□□ 0.11
VTI1A-206ENST00000489142 C11orf84Q9BUA3 381 aaPredicted RBP15.71■□□□□ 0.11
VTI1A-206ENST00000489142 C1orf112Q9NSG2 853 aa15.71■□□□□ 0.11
VTI1A-206ENST00000489142 SUCLA2Q9P2R7 463 aaPredicted RBP15.71■□□□□ 0.11
VTI1A-206ENST00000489142 COG5Q9UP83 839 aa15.71■□□□□ 0.11
VTI1A-206ENST00000489142 A0A087WZ62 844 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 IGKV6-21A0A0C4DH24 114 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 C5orf67F2Z3F1 127 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 NEMFO60524 1076 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 MAFO75444 373 aaPredicted RBP15.7■□□□□ 0.1
VTI1A-206ENST00000489142 BMP1P13497 986 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 TXKP42681 527 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 EPHA7Q15375 998 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 TIGD5Q53EQ6 642 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 SPOUT1Q5T280 376 aaKnown RBP15.7■□□□□ 0.1
VTI1A-206ENST00000489142 EP400NLQ6ZTU2 488 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 TPH2Q8IWU9 490 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 SLFN12Q8IYM2 578 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 TMEM143Q96AN5 459 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 NLRP4Q96MN2 994 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 UHRF1Q96T88 793 aaPredicted RBP15.7■□□□□ 0.1
VTI1A-206ENST00000489142 FDXACB1Q9BRP7 624 aaPredicted RBP15.7■□□□□ 0.1
VTI1A-206ENST00000489142 TMEM60Q9H2L4 133 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 UBE2ZQ9H832 354 aaPredicted RBP15.7■□□□□ 0.1
VTI1A-206ENST00000489142 RWDD3Q9Y3V2 267 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 MUC3AQ02505 3323 aa15.7■□□□□ 0.1
VTI1A-206ENST00000489142 A0A087WWV3 80 aa15.69■□□□□ 0.1
VTI1A-206ENST00000489142 ITGB1P05556 798 aa15.69■□□□□ 0.1
VTI1A-206ENST00000489142 RB1P06400 928 aa15.69■□□□□ 0.1
VTI1A-206ENST00000489142 KCNA5P22460 613 aa15.69■□□□□ 0.1
VTI1A-206ENST00000489142 DNAJB1P25685 340 aa15.69■□□□□ 0.1
VTI1A-206ENST00000489142 YWHABP31946 246 aaKnown RBP15.69■□□□□ 0.1
VTI1A-206ENST00000489142 MCM7P33993 719 aa15.69■□□□□ 0.1
VTI1A-206ENST00000489142 RBM25P49756 843 aaKnown RBP15.69■□□□□ 0.1
VTI1A-206ENST00000489142 DNM2P50570 870 aa15.69■□□□□ 0.1
VTI1A-206ENST00000489142 SAFBQ15424 915 aaKnown RBP eCLIP15.69■□□□□ 0.1
VTI1A-206ENST00000489142 AAK1Q2M2I8 961 aa15.69■□□□□ 0.1
VTI1A-206ENST00000489142 KLHL23Q8NBE8 558 aa15.69■□□□□ 0.1
VTI1A-206ENST00000489142 ZSCAN31Q96LW9 406 aaPredicted RBP15.69■□□□□ 0.1
VTI1A-206ENST00000489142 LLPHQ9BRT6 129 aaKnown RBP15.69■□□□□ 0.1
VTI1A-206ENST00000489142 NSUN3Q9H649 340 aaKnown RBP15.69■□□□□ 0.1
VTI1A-206ENST00000489142 TTC12Q9H892 705 aaPredicted RBP15.69■□□□□ 0.1
VTI1A-206ENST00000489142 ATP6V0A4Q9HBG4 840 aa15.69■□□□□ 0.1
VTI1A-206ENST00000489142 PCDHA12Q9UN75 941 aa15.69■□□□□ 0.1
VTI1A-206ENST00000489142 POTEMA6NI47 508 aa15.68■□□□□ 0.1
VTI1A-206ENST00000489142 ZSCAN20P17040 1043 aaPredicted RBP15.68■□□□□ 0.1
VTI1A-206ENST00000489142 GTF2F1P35269 517 aaKnown RBP eCLIP15.68■□□□□ 0.1
VTI1A-206ENST00000489142 POLGP54098 1239 aaPredicted RBP15.68■□□□□ 0.1
VTI1A-206ENST00000489142 FAM189BP81408 668 aa15.68■□□□□ 0.1
VTI1A-206ENST00000489142 LONRF3Q496Y0 759 aa15.68■□□□□ 0.1
VTI1A-206ENST00000489142 XKR9Q5GH70 373 aa15.68■□□□□ 0.1
VTI1A-206ENST00000489142 C4orf19Q8IY42 314 aa15.68■□□□□ 0.1
VTI1A-206ENST00000489142 FAM184AQ8NB25 1140 aa15.68■□□□□ 0.1
VTI1A-206ENST00000489142 EIF2AK1Q9BQI3 630 aaKnown RBP15.68■□□□□ 0.1
VTI1A-206ENST00000489142 GCOM2Q9BZD3 368 aaPredicted RBP15.68■□□□□ 0.1
VTI1A-206ENST00000489142 SH2B1Q9NRF2 756 aaPredicted RBP15.68■□□□□ 0.1
VTI1A-206ENST00000489142 RNF19AQ9NV58 838 aa15.68■□□□□ 0.1
VTI1A-206ENST00000489142 TYW1Q9NV66 732 aaKnown RBP15.68■□□□□ 0.1
VTI1A-206ENST00000489142 TMEM161AQ9NX61 479 aa15.68■□□□□ 0.1
VTI1A-206ENST00000489142 PLAGL2Q9UPG8 496 aa15.68■□□□□ 0.1
VTI1A-206ENST00000489142 PCDHGC5Q9Y5F6 944 aa15.68■□□□□ 0.1
VTI1A-206ENST00000489142 H3BQ06 376 aaPredicted RBP15.67■□□□□ 0.1
VTI1A-206ENST00000489142 TNFRSF10AO00220 468 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 DKC1O60832 514 aaKnown RBP eCLIP15.67■□□□□ 0.1
VTI1A-206ENST00000489142 SLITRK3O94933 977 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 SRGAP2CP0DJJ0 459 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 CAMK1Q14012 370 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 NBR1Q14596 966 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 EMC2Q15006 297 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 ZNF174Q15697 407 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 ECHDC2Q86YB7 292 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 SLC7A3Q8WY07 619 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 MTMR9Q96QG7 549 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 PLVAPQ9BX97 442 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 DHX33Q9H6R0 707 aaKnown RBP15.67■□□□□ 0.1
VTI1A-206ENST00000489142 ZSWIM4Q9H7M6 989 aa15.67■□□□□ 0.1
VTI1A-206ENST00000489142 COL4A3BPQ9Y5P4 624 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms