RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 TMEM266Q2M3C6 531 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 TCTN1Q2MV58 587 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 PTCRAQ6ISU1 281 aaPredicted RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 ELMSAN1Q6PJG2 1045 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 PIK3AP1Q6ZUJ8 805 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 SRGAP1Q7Z6B7 1085 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 C4orf19Q8IY42 314 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 LRRC43Q8N309 656 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 ERMNQ8TAM6 284 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 PSPC1Q8WXF1 523 aaKnown RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 CEP170P1Q96L14 293 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 MBOAT7Q96N66 472 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 FAM193BQ96PV7 902 aaPredicted RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 LLPHQ9BRT6 129 aaKnown RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 NGRNQ9NPE2 291 aaKnown RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 SH2B1Q9NRF2 756 aaPredicted RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 KANSL3Q9P2N6 904 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 NOL7Q9UMY1 257 aaKnown RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 PLAGL2Q9UPG8 496 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 LIMCH1Q9UPQ0 1083 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 LAMA2P24043 3122 aaKnown RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 MYH11P35749 1972 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 A0A0U1RQF3 1178 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 C9IYK1 514 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 ST18O60284 1047 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 ERLIN2O94905 339 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 XRCC6P12956 609 aaKnown RBP eCLIP8.36□□□□□ -1.07
CPNE1-226ENST00000486021 DARSP14868 501 aaKnown RBP8.36□□□□□ -1.07
CPNE1-226ENST00000486021 ATP4AP20648 1035 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 IBSPP21815 317 aaPredicted RBP8.36□□□□□ -1.07
CPNE1-226ENST00000486021 MUTP22033 750 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 NDUFV1P49821 464 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 CLCN3P51790 818 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 TFF2Q03403 129 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 CALCRLQ16602 461 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 PAN2Q504Q3 1202 aaKnown RBP8.36□□□□□ -1.07
CPNE1-226ENST00000486021 TCEAL5Q5H9L2 206 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 TWF2Q6IBS0 349 aaKnown RBP8.36□□□□□ -1.07
CPNE1-226ENST00000486021 CATSPER4Q7RTX7 472 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 FAM228AQ86W67 206 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 RHPN2Q8IUC4 686 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 ETNPPLQ8TBG4 499 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 URGCPQ8TCY9 931 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 POF1BQ8WVV4 589 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 GTF3C6Q969F1 213 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 LENG9Q96B70 501 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 ZNF558Q96NG5 402 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 MTRQ99707 1265 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 TRAIPQ9BWF2 469 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 RC3H2Q9HBD1 1191 aaKnown RBP8.36□□□□□ -1.07
CPNE1-226ENST00000486021 CYP26B1Q9NR63 512 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 TLR9Q9NR96 1032 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 SUCLA2Q9P2R7 463 aaPredicted RBP8.36□□□□□ -1.07
CPNE1-226ENST00000486021 DPP7Q9UHL4 492 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 TPCN1Q9ULQ1 816 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 KCNJ14Q9UNX9 436 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 SSX2IPQ9Y2D8 614 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 HCN4Q9Y3Q4 1203 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 TELO2Q9Y4R8 837 aa8.36□□□□□ -1.07
CPNE1-226ENST00000486021 GRXCR2A6NFK2 248 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 ZBTB42B2RXF5 422 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 NEMFO60524 1076 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 PPFIA3O75145 1194 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 DGAT1O75907 488 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 ARHGEF15O94989 841 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 TDP2O95551 362 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 YWHABP31946 246 aaKnown RBP8.35□□□□□ -1.07
CPNE1-226ENST00000486021 PHKA2P46019 1235 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 KCNQ1P51787 676 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 FAM189BP81408 668 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 PLCB3Q01970 1234 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 RNASELQ05823 741 aaKnown RBP8.35□□□□□ -1.07
CPNE1-226ENST00000486021 POU5F1BQ06416 359 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 TARBP2Q15633 366 aaKnown RBP8.35□□□□□ -1.07
CPNE1-226ENST00000486021 XKR9Q5GH70 373 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 HAUS3Q68CZ6 603 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 KRT40Q6A162 431 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 NCAPH2Q6IBW4 605 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 GLB1LQ6UWU2 654 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 APBB1IPQ7Z5R6 666 aaPredicted RBP8.35□□□□□ -1.07
CPNE1-226ENST00000486021 RTN4RL1Q86UN2 441 aaPredicted RBP8.35□□□□□ -1.07
CPNE1-226ENST00000486021 ECHDC2Q86YB7 292 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 LRRC71Q8N4P6 559 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 KLHL23Q8NBE8 558 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 SPPL3Q8TCT6 385 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 MRPS27Q92552 414 aaKnown RBP8.35□□□□□ -1.07
CPNE1-226ENST00000486021 TMEM169Q96HH4 297 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 C8orf76Q96K31 380 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 IGFLR1Q9H665 355 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 TLE6Q9H808 572 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 KCNMB3Q9NPA1 279 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 ENTPD7Q9NQZ7 604 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 ANKEF1Q9NU02 776 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 SPG21Q9NZD8 308 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 KCNG1Q9UIX4 513 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 CD207Q9UJ71 328 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 COL4A3BPQ9Y5P4 624 aa8.35□□□□□ -1.07
CPNE1-226ENST00000486021 MRPL42Q9Y6G3 142 aaKnown RBP8.35□□□□□ -1.07
CPNE1-226ENST00000486021 PHLPP2Q6ZVD8 1323 aa8.34□□□□□ -1.07
CPNE1-226ENST00000486021 CNTNAP2Q9UHC6 1331 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms