RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 TCRBV5S4A2TA0A5A2 114 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 ANO9A1A5B4 782 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 INSRRP14616 1297 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 AKAP5P24588 427 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 FPR2P25090 351 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 CD40P25942 277 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 SARSP49591 514 aaKnown RBP5.76□□□□□ -1.49
VPS13A-211ENST00000484581 MORC3Q14149 939 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 DHX8Q14562 1220 aaKnown RBP5.76□□□□□ -1.49
VPS13A-211ENST00000484581 ZNF827Q17R98 1081 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 ARHGAP29Q52LW3 1261 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 RRP12Q5JTH9 1297 aaKnown RBP5.76□□□□□ -1.49
VPS13A-211ENST00000484581 FSTL4Q6MZW2 842 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 CC2D1AQ6P1N0 951 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-211ENST00000484581 TTLL7Q6ZT98 887 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 FRMD7Q6ZUT3 714 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 CEP68Q76N32 757 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 OTOP3Q7RTS5 596 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 PTRH1Q86Y79 214 aaKnown RBP5.76□□□□□ -1.49
VPS13A-211ENST00000484581 CMIPQ8IY22 773 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 CARFQ8N187 725 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 NETO2Q8NC67 525 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 DLG3Q92796 817 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 TRMT2BQ96GJ1 504 aaKnown RBP5.76□□□□□ -1.49
VPS13A-211ENST00000484581 ZMAT4Q9H898 229 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 C1orf112Q9NSG2 853 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 USP36Q9P275 1121 aaKnown RBP5.76□□□□□ -1.49
VPS13A-211ENST00000484581 USP25Q9UHP3 1055 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 COA3Q9Y2R0 106 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-211ENST00000484581 B3GALT1Q9Y5Z6 326 aa5.76□□□□□ -1.49
VPS13A-211ENST00000484581 FRMPD2Q68DX3 1309 aaPredicted RBP5.75□□□□□ -1.49
VPS13A-211ENST00000484581 MAN2B1O00754 1011 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 CLASP2O75122 1294 aaKnown RBP5.75□□□□□ -1.49
VPS13A-211ENST00000484581 ZBTB7AO95365 584 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 CYP17A1P05093 508 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 SAFBQ15424 915 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS13A-211ENST00000484581 ESRP1Q6NXG1 681 aaKnown RBP5.75□□□□□ -1.49
VPS13A-211ENST00000484581 B3GNT9Q6UX72 402 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 RIOX2Q8IUF8 465 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 SMARCC2Q8TAQ2 1214 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 UHMK1Q8TAS1 419 aaKnown RBP5.75□□□□□ -1.49
VPS13A-211ENST00000484581 SH3RF2Q8TEC5 729 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 CPA5Q8WXQ8 436 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 LRGUKQ96M69 825 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 ARPC5LQ9BPX5 153 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 MS4A5Q9H3V2 200 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 DDX21Q9NR30 783 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS13A-211ENST00000484581 MAN1C1Q9NR34 630 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 BTG4Q9NY30 223 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 MARCH2Q9P0N8 246 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 NTMQ9P121 344 aa5.75□□□□□ -1.49
VPS13A-211ENST00000484581 KCNK3O14649 394 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 NKRFO15226 690 aaKnown RBP eCLIP5.74□□□□□ -1.49
VPS13A-211ENST00000484581 NOBOXO60393 691 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 CNR2P34972 360 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 HTR3AP46098 478 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 FNTBP49356 437 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 GALEQ14376 348 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 PUM1Q14671 1186 aaKnown RBP eCLIP5.74□□□□□ -1.49
VPS13A-211ENST00000484581 ACAP2Q15057 778 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 PDCD1Q15116 288 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 CLUL1Q15846 466 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 IFIT1BQ5T764 474 aaKnown RBP5.74□□□□□ -1.49
VPS13A-211ENST00000484581 CYB5RLQ6IPT4 315 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 EP400NLQ6ZTU2 488 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 TEX2Q8IWB9 1127 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 NLGN4XQ8N0W4 816 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 SPICE1Q8N0Z3 855 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 CSRNP2Q9H175 543 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 SLC12A5Q9H2X9 1139 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 KCNH7Q9NS40 1196 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.74□□□□□ -1.49
VPS13A-211ENST00000484581 GULP1Q9UBP9 304 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 DDX20Q9UHI6 824 aaKnown RBP5.74□□□□□ -1.49
VPS13A-211ENST00000484581 MYRFQ9Y2G1 1151 aa5.74□□□□□ -1.49
VPS13A-211ENST00000484581 C22orf46C9J442 243 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 KRIT1O00522 736 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 SCDO00767 359 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 OFD1O75665 1012 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 DGKIO75912 1065 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 COL6A2P12110 1019 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 AGXTP21549 392 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 NEK3P51956 506 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 ADKP55263 362 aaKnown RBP5.73□□□□□ -1.49
VPS13A-211ENST00000484581 DLX2Q07687 328 aaPredicted RBP5.73□□□□□ -1.49
VPS13A-211ENST00000484581 CACNB2Q08289 660 aaPredicted RBP5.73□□□□□ -1.49
VPS13A-211ENST00000484581 EPHA7Q15375 998 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 COBLL1Q53SF7 1204 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 MROH9Q5TGP6 573 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 IL31Q6EBC2 164 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 CYP4F22Q6NT55 531 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 C11orf96Q7Z7L8 435 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 SLC35G2Q8TBE7 412 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 PIP4K2CQ8TBX8 421 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 PLEKHO2Q8TD55 490 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 JADE3Q92613 823 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 ZBTB8AQ96BR9 441 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 TAAR9Q96RI9 348 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 STRBPQ96SI9 672 aaKnown RBP5.73□□□□□ -1.49
VPS13A-211ENST00000484581 SLC6A20Q9NP91 592 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms