RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 GTSE1Q9NYZ3 720 aa11.67□□□□□ -0.54
PATJ-207ENST00000484562 PCDHB6Q9Y5E3 794 aa11.67□□□□□ -0.54
PATJ-207ENST00000484562 MYO1DO94832 1006 aa11.67□□□□□ -0.54
PATJ-207ENST00000484562 EFTUD2Q15029 972 aaKnown RBP eCLIP11.67□□□□□ -0.546e-7■■■□□ 16.6
PATJ-207ENST00000484562 TMEM179Q6ZVK1 233 aa11.67□□□□□ -0.54
PATJ-207ENST00000484562 CATSPER4Q7RTX7 472 aa11.67□□□□□ -0.54
PATJ-207ENST00000484562 TADA2BQ86TJ2 420 aa11.67□□□□□ -0.54
PATJ-207ENST00000484562 XXYLT1Q8NBI6 393 aa11.67□□□□□ -0.54
PATJ-207ENST00000484562 ALKBH8Q96BT7 664 aaKnown RBP11.67□□□□□ -0.54
PATJ-207ENST00000484562 BRIP1Q9BX63 1249 aa11.67□□□□□ -0.54
PATJ-207ENST00000484562 COG4Q9H9E3 785 aa11.67□□□□□ -0.54
PATJ-207ENST00000484562 FAM187AA6NFU0 413 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 KRT7P08729 469 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 CHRNA3P32297 505 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 OSTNP61366 133 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 CDO1Q16878 200 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 SLFNL1Q499Z3 407 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 TMEM259Q4ZIN3 620 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 GANCQ8TET4 914 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 DACH2Q96NX9 599 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 BHMT2Q9H2M3 363 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 ABCF3Q9NUQ8 709 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 DDX56Q9NY93 547 aaKnown RBP11.66□□□□□ -0.54
PATJ-207ENST00000484562 KDM5AP29375 1690 aaKnown RBP11.66□□□□□ -0.54
PATJ-207ENST00000484562 PZPP20742 1482 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 STK36Q9NRP7 1315 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 PALMO75781 387 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 GGPS1O95749 300 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 RCAN1P53805 252 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 TSPY1Q01534 308 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 MKRN3Q13064 507 aaKnown RBP11.66□□□□□ -0.54
PATJ-207ENST00000484562 Q3C1V9 767 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 PPP6R3Q5H9R7 873 aaPredicted RBP11.66□□□□□ -0.54
PATJ-207ENST00000484562 KIRREL3Q8IZU9 778 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 CATSPER1Q8NEC5 780 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 CEP70Q8NHQ1 597 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 TRIM62Q9BVG3 475 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 CDV3Q9UKY7 258 aaKnown RBP11.66□□□□□ -0.54
PATJ-207ENST00000484562 RNF103-CHMP3A0A140T963 221 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 FAM95CA0A1B0GW59 222 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 CFAP73A6NFT4 308 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 FOXP2O15409 715 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 PHKA2P46019 1235 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 NEK2P51955 445 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 STX19Q8N4C7 294 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 TBC1D22BQ9NU19 505 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 ZSWIM5Q9P217 1185 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 SNX24Q9Y343 169 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 CCDC22O60826 627 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 PEX3P56589 373 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 NSUN2Q08J23 767 aaKnown RBP eCLIP11.66□□□□□ -0.54
PATJ-207ENST00000484562 MED21Q13503 144 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 USP17L2Q6R6M4 530 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 CDKL3Q8IVW4 592 aaPredicted RBP11.66□□□□□ -0.54
PATJ-207ENST00000484562 OTUB1Q96FW1 271 aaPredicted RBP11.66□□□□□ -0.54
PATJ-207ENST00000484562 BPIFA3Q9BQP9 254 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 KIF17Q9P2E2 1029 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 ITM2BQ9Y287 266 aa11.66□□□□□ -0.54
PATJ-207ENST00000484562 HUS1O60921 280 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 SERPINB4P48594 390 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 PMS2P54278 862 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 SLC10A5Q5PT55 438 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 TRIM72Q6ZMU5 477 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 ELMOD1Q8N336 334 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 SLC26A7Q8TE54 656 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 RUBCNQ92622 972 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 SAAL1Q96ER3 474 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 TLR7Q9NYK1 1049 aaKnown RBP11.65□□□□□ -0.54
PATJ-207ENST00000484562 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
PATJ-207ENST00000484562 HACD3Q9P035 362 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 IP6K2Q9UHH9 426 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 CLDN3O15551 220 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 CTTNQ14247 550 aaKnown RBP11.65□□□□□ -0.54
PATJ-207ENST00000484562 LLGL1Q15334 1064 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 MAPK6Q16659 721 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 UBE2SQ16763 222 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 ENOSF1Q7L5Y1 443 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 BEST2Q8NFU1 509 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 C2orf40Q9H1Z8 148 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 VPS11Q9H270 941 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 GPBP1L1Q9HC44 474 aaPredicted RBP11.65□□□□□ -0.54
PATJ-207ENST00000484562 SEL1LQ9UBV2 794 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 TMEM2Q9UHN6 1383 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 GOLGA8IPA6NC78 632 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 GOLGA8JA6NMD2 632 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 ZFXP17010 805 aaPredicted RBP11.65□□□□□ -0.54
PATJ-207ENST00000484562 SDC4P31431 198 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 PRELPP51888 382 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 ZNF699Q32M78 642 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 TBC1D10BQ4KMP7 808 aaPredicted RBP11.65□□□□□ -0.54
PATJ-207ENST00000484562 GFM2Q969S9 779 aaKnown RBP11.65□□□□□ -0.54
PATJ-207ENST00000484562 NLRP4Q96MN2 994 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 MTA3Q9BTC8 594 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 TRIM54Q9BYV2 358 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 UBE4BO95155 1302 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 DNMT1P26358 1616 aaKnown RBP11.65□□□□□ -0.54
PATJ-207ENST00000484562 NNMTP40261 264 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 ARFIP2P53365 341 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 PPP2R2AP63151 447 aa11.65□□□□□ -0.54
PATJ-207ENST00000484562 FAM20AQ96MK3 541 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms