RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 BHMT2Q9H2M3 363 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 XPNPEP1Q9NQW7 623 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 GINS2Q9Y248 185 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 TET1Q8NFU7 2136 aa12.05□□□□□ -0.48
ATG4B-219ENST00000479941 MYH15Q9Y2K3 1946 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 ABHD14A-ACY1A0A1B0GW23 586 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 USO1O60763 962 aaKnown RBP12.04□□□□□ -0.48
ATG4B-219ENST00000479941 CUTAO60888 179 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 RPS6KA5O75582 802 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 EIF4BP23588 611 aaKnown RBP12.04□□□□□ -0.48
ATG4B-219ENST00000479941 GRB10Q13322 594 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 MXD4Q14582 209 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-219ENST00000479941 LRIT3Q3SXY7 679 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 TMEM119Q4V9L6 283 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 ZNF410Q86VK4 478 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 RHPN2Q8IUC4 686 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 RASSF8Q8NHQ8 419 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 PRPF31Q8WWY3 499 aaKnown RBP12.04□□□□□ -0.48
ATG4B-219ENST00000479941 NLRP7Q8WX94 980 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 SYMPKQ92797 1274 aaKnown RBP12.04□□□□□ -0.48
ATG4B-219ENST00000479941 TMEM143Q96AN5 459 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 SCLT1Q96NL6 688 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 CLIC6Q96NY7 704 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 OSMRQ99650 979 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 ADAMTS10Q9H324 1103 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-219ENST00000479941 CCDC39Q9UFE4 941 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 RCOR1Q9UKL0 485 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-219ENST00000479941 COL4A3BPQ9Y5P4 624 aa12.04□□□□□ -0.48
ATG4B-219ENST00000479941 ZBBXA8MT70 800 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 GPR182O15218 404 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 CYP11B2P19099 503 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 CD52P31358 61 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 ARL2P36404 184 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 PAK2Q13177 524 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 KARSQ15046 597 aaKnown RBP12.03□□□□□ -0.48
ATG4B-219ENST00000479941 HABP4Q5JVS0 413 aaKnown RBP12.03□□□□□ -0.48
ATG4B-219ENST00000479941 SPECC1Q5M775 1068 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 KCNK18Q7Z418 384 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 EPSTI1Q96J88 318 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 PPP1R16BQ96T49 567 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 PLIN2Q99541 437 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 FTHL17Q9BXU8 183 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 GCOM2Q9BZD3 368 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-219ENST00000479941 OSBPL7Q9BZF2 842 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 INO80BQ9C086 356 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-219ENST00000479941 SCAND2PQ9GZW5 306 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-219ENST00000479941 AGO3Q9H9G7 860 aaKnown RBP12.03□□□□□ -0.48
ATG4B-219ENST00000479941 CDHR5Q9HBB8 845 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 CXXC1Q9P0U4 656 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-219ENST00000479941 PADI3Q9ULW8 664 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 SLC4A7Q9Y6M7 1214 aa12.03□□□□□ -0.48
ATG4B-219ENST00000479941 ARID2Q68CP9 1835 aa12.02□□□□□ -0.48
ATG4B-219ENST00000479941 A0A087WZ62 844 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 PLA2G4BP0C869 781 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 DARSP14868 501 aaKnown RBP12.02□□□□□ -0.49
ATG4B-219ENST00000479941 NCLP19338 710 aaKnown RBP12.02□□□□□ -0.49
ATG4B-219ENST00000479941 KCNJ6P48051 423 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 ME1P48163 572 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 POU5F1BQ06416 359 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 LAMTOR4Q0VGL1 99 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 TFDP1Q14186 410 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 AXDND1Q5T1B0 1012 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-219ENST00000479941 FAM102BQ5T8I3 360 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 RINT1Q6NUQ1 792 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 USP49Q70CQ1 688 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 SYT2Q8N9I0 419 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-219ENST00000479941 PHOSPHO2Q8TCD6 241 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 TMEM40Q8WWA1 233 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 NLRP4Q96MN2 994 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 SLC9A7Q96T83 725 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 FDXACB1Q9BRP7 624 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-219ENST00000479941 TIPINQ9BVW5 301 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 KCND2Q9NZV8 630 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 PCDHA7Q9UN72 937 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 ST3GAL5Q9UNP4 418 aa12.02□□□□□ -0.49
ATG4B-219ENST00000479941 NOC2LQ9Y3T9 749 aaKnown RBP12.02□□□□□ -0.49
ATG4B-219ENST00000479941 SZT2Q5T011 3432 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-219ENST00000479941 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-219ENST00000479941 SSBP05455 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
ATG4B-219ENST00000479941 SRGAP2CP0DJJ0 459 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 PLCG1P19174 1290 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 SFPQP23246 707 aaKnown RBP eCLIP12.01□□□□□ -0.49
ATG4B-219ENST00000479941 SLC12A3P55017 1021 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 WDR5P61964 334 aaKnown RBP12.01□□□□□ -0.49
ATG4B-219ENST00000479941 NFX1Q12986 1120 aaKnown RBP12.01□□□□□ -0.49
ATG4B-219ENST00000479941 PCBP1Q15365 356 aaKnown RBP eCLIP12.01□□□□□ -0.49
ATG4B-219ENST00000479941 TCTN1Q2MV58 587 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 RRAGBQ5VZM2 374 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 CCDC73Q6ZRK6 1079 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 C1orf186Q6ZWK4 172 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 MAEAQ7L5Y9 396 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 SRGAP1Q7Z6B7 1085 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 FAM228AQ86W67 206 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 KSR1Q8IVT5 923 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 RNF149Q8NC42 400 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 ASAP3Q8TDY4 903 aa12.01□□□□□ -0.49
ATG4B-219ENST00000479941 LEO1Q8WVC0 666 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms