RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	NOC2L	Q9Y3T9	749 aa	Known RBP	13.97	□□□□□ -0.17
SBF1-208	ENST00000477234	CACNA1I	Q9P0X4	2223 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	NFASC	O94856	1347 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	MAP1B	P46821	2468 aa	Known RBP	13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	SPDYE3	A6NKU9	549 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	MGEA5	O60502	916 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	ATP9A	O75110	1047 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	SP9	P0CG40	484 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	FGFR1	P11362	822 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	SRF	P11831	508 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	KLRC1	P26715	233 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	SMARCA1	P28370	1054 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	PLCB4	Q15147	1175 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	ZNF484	Q5JVG2	852 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	VARS2	Q5ST30	1063 aa	Known RBP	13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	RNF20	Q5VTR2	975 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	VPS52	Q8N1B4	723 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	RRP36	Q96EU6	259 aa	Known RBP	13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	RHOBTB2	Q9BYZ6	727 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	C22orf23	Q9BZE7	217 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	TBC1D17	Q9HA65	648 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234		U3KPZ7	1027 aa	Predicted RBP	13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	EVPL	Q92817	2033 aa		13.96	□□□□□ -0.17
SBF1-208	ENST00000477234	DENND4A	Q7Z401	1863 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	RBAK-RBAKDN	I3L0D1	243 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	CTSA	P10619	480 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	MAGEA9	P43362	315 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	DDX53	Q86TM3	631 aa	Known RBP	13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	ATRIP	Q8WXE1	791 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	CHAMP1	Q96JM3	812 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	LZTS2	Q9BRK4	669 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	PSTPIP2	Q9H939	334 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	JADE2	Q9NQC1	790 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	FBXO4	Q9UKT5	387 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	CEP131	Q9UPN4	1083 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	SSX2IP	Q9Y2D8	614 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	UBIAD1	Q9Y5Z9	338 aa		13.95	□□□□□ -0.18
SBF1-208	ENST00000477234	MEIS2	O14770	477 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	SEC24B	O95487	1268 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	WEE2	P0C1S8	567 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	SKI	P12755	728 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	ITGB5	P18084	799 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	TMOD1	P28289	359 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	KIF5B	P33176	963 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	SEC23A	Q15436	765 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	USP17L6P	Q6QN14	398 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	TMC5	Q6UXY8	1006 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	CATIP	Q7Z7H3	387 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	KIAA0319L	Q8IZA0	1049 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	SUMF1	Q8NBK3	374 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	CMAS	Q8NFW8	434 aa	Predicted RBP	13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	RIN2	Q8WYP3	895 aa	Predicted RBP	13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	MAP4K1	Q92918	833 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	TBC1D32	Q96NH3	1257 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	MAP3K14	Q99558	947 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	LSG1	Q9H089	658 aa	Known RBP	13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	ZBP1	Q9H171	429 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	PCDHGA2	Q9Y5H1	932 aa		13.94	□□□□□ -0.18
SBF1-208	ENST00000477234	FAM208B	Q5VWN6	2430 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234		A0A0U1RQF3	1178 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	CFH	P08603	1231 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	RBM25	P49756	843 aa	Known RBP	13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	GNAQ	P50148	359 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	ATXN1	P54253	815 aa	Known RBP	13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	ANAPC15	P60006	121 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	ACTR2	P61160	394 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	DSC3	Q14574	896 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	LRRC55	Q6ZSA7	311 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	ECHDC2	Q86YB7	292 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	C12orf76	Q8N812	135 aa	Predicted RBP	13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	SLC22A17	Q8WUG5	538 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	MAP7D2	Q96T17	732 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	SPZ1	Q9BXG8	430 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	BCO2	Q9BYV7	579 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	CDH22	Q9UJ99	828 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	TELO2	Q9Y4R8	837 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	ATRX	P46100	2492 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	BAHCC1	Q9P281	2608 aa		13.93	□□□□□ -0.18
SBF1-208	ENST00000477234	BACH1	O14867	736 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	MAGEB2	O15479	319 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	LAMTOR5	O43504	91 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	ADRB1	P08588	477 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	EPCAM	P16422	314 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	KLRC2	P26717	231 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	GBP2	P32456	591 aa	Predicted RBP	13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	METAP2	P50579	478 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	BCAR1	P56945	870 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	CDC42EP1	Q00587	391 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	FAM228A	Q86W67	206 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	CTCFL	Q8NI51	663 aa	Predicted RBP	13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	TRAPPC12	Q8WVT3	735 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	TMEM40	Q8WWA1	233 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	PCYT2	Q99447	389 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	ARHGEF3	Q9NR81	526 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	KCNH7	Q9NS40	1196 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	EPS15L1	Q9UBC2	864 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	HCST	Q9UBK5	93 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	MYH9	P35579	1960 aa	Known RBP	13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms