RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MTHFD2P13995 350 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 APEX1P27695 318 aaKnown RBP7.81□□□□□ -1.16
VPS50-212ENST00000476413 ADKP55263 362 aaKnown RBP7.81□□□□□ -1.16
VPS50-212ENST00000476413 BCAR1P56945 870 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 GTF2H3Q13889 308 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 GFOD2Q3B7J2 385 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 B3GNT9Q6UX72 402 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 PRR23BQ6ZRT6 265 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 IGDCC3Q8IVU1 814 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 CCDC136Q96JN2 1154 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 TMEM209Q96SK2 561 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 KCND1Q9NSA2 647 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 OBP2AQ9NY56 170 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 ARHGAP20Q9P2F6 1191 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 CDY2AQ9Y6F7 541 aa7.81□□□□□ -1.16
VPS50-212ENST00000476413 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.81□□□□□ -1.16
VPS50-212ENST00000476413 GOLGA6CA6NDK9 693 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 GOLGA6BA6NDN3 693 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 VSTM5A8MXK1 200 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 GOLGA6DP0CG33 693 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 U2AF1L5P0DN76 240 aaPredicted RBP7.8□□□□□ -1.16
VPS50-212ENST00000476413 SLC5A3P53794 718 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 U2AF1Q01081 240 aaKnown RBP eCLIP7.8□□□□□ -1.16
VPS50-212ENST00000476413 MAP9Q49MG5 647 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 MBNL2Q5VZF2 373 aaKnown RBP7.8□□□□□ -1.16
VPS50-212ENST00000476413 CCSAPQ6IQ19 270 aaPredicted RBP7.8□□□□□ -1.16
VPS50-212ENST00000476413 MPZL3Q6UWV2 235 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 STK32CQ86UX6 486 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 CLIP3Q96DZ5 547 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 TACO1Q9BSH4 297 aaKnown RBP7.8□□□□□ -1.16
VPS50-212ENST00000476413 IFT122Q9HBG6 1241 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 GOLGA6AQ9NYA3 693 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 EVLQ9UI08 416 aaPredicted RBP7.8□□□□□ -1.16
VPS50-212ENST00000476413 ZFP69BQ9UJL9 534 aa7.8□□□□□ -1.16
VPS50-212ENST00000476413 VCAM1P19320 739 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 AKAP5P24588 427 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 GLRBP48167 497 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 EPHB3P54753 998 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 PPARAQ07869 468 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 TARBP2Q15633 366 aaKnown RBP7.79□□□□□ -1.16
VPS50-212ENST00000476413 MINDY4Q4G0A6 757 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 DGKHQ86XP1 1220 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 BCL6BQ8N143 479 aaPredicted RBP7.79□□□□□ -1.16
VPS50-212ENST00000476413 OR14C36Q8NHC7 312 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 RSAD2Q8WXG1 361 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 RPGRQ92834 1020 aaKnown RBP7.79□□□□□ -1.16
VPS50-212ENST00000476413 RUNDC1Q96C34 613 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 LRGUKQ96M69 825 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 ZSWIM3Q96MP5 696 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 NOX5Q96PH1 765 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 FDXACB1Q9BRP7 624 aaPredicted RBP7.79□□□□□ -1.16
VPS50-212ENST00000476413 NSUN3Q9H649 340 aaKnown RBP7.79□□□□□ -1.16
VPS50-212ENST00000476413 GCM1Q9NP62 436 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.79□□□□□ -1.16
VPS50-212ENST00000476413 SIRT5Q9NXA8 310 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 FTSJ1Q9UET6 329 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 PCDHB6Q9Y5E3 794 aa7.79□□□□□ -1.16
VPS50-212ENST00000476413 A0A0A6YYK5 440 aaPredicted RBP7.78□□□□□ -1.16
VPS50-212ENST00000476413 TEX51A0A1B0GUA7 166 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 FXR1P51114 621 aaKnown RBP eCLIP7.78□□□□□ -1.16
VPS50-212ENST00000476413 CDK17Q00537 523 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 CD83Q01151 205 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 ANO4Q32M45 955 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 GAREM2Q75VX8 874 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 STPG3Q8N7X2 389 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 LINC00482Q8N8I6 264 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 MZB1Q8WU39 189 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 COA7Q96BR5 231 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 DIRC2Q96SL1 478 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 SOX7Q9BT81 388 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 C11orf84Q9BUA3 381 aaPredicted RBP7.78□□□□□ -1.16
VPS50-212ENST00000476413 GTPBP4Q9BZE4 634 aaKnown RBP7.78□□□□□ -1.16
VPS50-212ENST00000476413 ARNT2Q9HBZ2 717 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 KCMF1Q9P0J7 381 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 SCOCQ9UIL1 159 aa7.78□□□□□ -1.16
VPS50-212ENST00000476413 SEC24DO94855 1032 aaPredicted RBP7.77□□□□□ -1.17
VPS50-212ENST00000476413 COL6A1P12109 1028 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 JUNBP17275 347 aaPredicted RBP7.77□□□□□ -1.17
VPS50-212ENST00000476413 ANTXR2P58335 489 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 CCT2P78371 535 aaKnown RBP7.77□□□□□ -1.17
VPS50-212ENST00000476413 NFATC3Q12968 1075 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 SPIDRQ14159 915 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 GALEQ14376 348 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 ZNF267Q14586 743 aaPredicted RBP7.77□□□□□ -1.17
VPS50-212ENST00000476413 ADRM1Q16186 407 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 LILRA6Q6PI73 481 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 BMP8AQ7Z5Y6 402 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 CATIPQ7Z7H3 387 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 THEMISQ8N1K5 641 aaPredicted RBP7.77□□□□□ -1.17
VPS50-212ENST00000476413 PPM1NQ8N819 430 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 CDYL2Q8N8U2 506 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 OR5AN1Q8NGI8 311 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 SLC35G2Q8TBE7 412 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 GAB3Q8WWW8 586 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 TAAR9Q96RI9 348 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 SGPP1Q9BX95 441 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 CSRNP2Q9H175 543 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 EPB41L4BQ9H329 900 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 USP18Q9UMW8 372 aa7.77□□□□□ -1.17
VPS50-212ENST00000476413 CAND2O75155 1236 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms