RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	KCNH5	Q8NCM2	988 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	ANGPTL6	Q8NI99	470 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	FBXO30	Q8TB52	745 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC22A8	Q8TCC7	542 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	CABLES1	Q8TDN4	633 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	ATP8B4	Q8TF62	1192 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	BCL7C	Q8WUZ0	217 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	HERVK_113	Q902F9	699 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	RMDN1	Q96DB5	314 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	VPS50	Q96JG6	964 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	MAEL	Q96JY0	434 aa	Known RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	CNDP1	Q96KN2	507 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	NLRP4	Q96MN2	994 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	RPRD1A	Q96P16	312 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	NUDCD1	Q96RS6	583 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	SECISBP2	Q96T21	854 aa	Known RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	EDEM3	Q9BZQ6	932 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	FHDC1	Q9C0D6	1143 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	LMAN2L	Q9H0V9	348 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	GBA3	Q9H227	469 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	MROH8	Q9H579	483 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	VIPAS39	Q9H9C1	493 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC38A10	Q9HBR0	1119 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	CAPN10	Q9HC96	672 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	ZSWIM6	Q9HCJ5	1215 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	CNGB3	Q9NQW8	809 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	C8orf4	Q9NR00	106 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	ATP8A2	Q9NTI2	1148 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	MRGBP	Q9NV56	204 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	USP40	Q9NVE5	1235 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	NOP53	Q9NZM5	478 aa	Known RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	REV1	Q9UBZ9	1251 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	AMACR	Q9UHK6	382 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	TAGLN3	Q9UI15	199 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	ANAPC5	Q9UJX4	755 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	VANGL2	Q9ULK5	521 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	HPCAL4	Q9UM19	191 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	EDAR	Q9UNE0	448 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	MTF2	Q9Y483	593 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	COMMD3-BMI1	R4GMX3	469 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	PHLPP2	Q6ZVD8	1323 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	ADGRB3	O60242	1522 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	GLI2	P10070	1586 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	MROH1	Q8NDA8	1641 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	PTPRT	O14522	1441 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	PLCH2	O75038	1416 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	FRMD3	A2A2Y4	597 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	PTPDC1	A2A3K4	754 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	SPDYE2B	A6NHP3	402 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	SPDYE5	A6NIY4	337 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	TMEM114	B3SHH9	223 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835		F8W810	466 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	GOLGA8S	H3BPF8	625 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835		H3BQV1	296 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	PSMD9	O00233	223 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	ST8SIA5	O15466	376 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	PEX1	O43933	1283 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	ADCY3	O60266	1144 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	ST18	O60284	1047 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	PALM	O75781	387 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	ALDH1L1	O75891	902 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	SEC24D	O94855	1032 aa	Predicted RBP	4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	RHOBTB3	O94955	611 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	ADCY5	O95622	1261 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	CNOT4	O95628	575 aa	Known RBP	4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	BAG3	O95817	575 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	GUCA1C	O95843	209 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	NPPA	P01160	153 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	HLA-DRA	P01903	254 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC4A1	P02730	911 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	GSTT2	P0CG29	244 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	GSTT2B	P0CG30	244 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	SPDYE6	P0CI01	402 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	CKB	P12277	381 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	ALAD	P13716	330 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	HPGD	P15428	266 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	PDGFRA	P16234	1089 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	EPB42	P16452	691 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	HSPA6	P17066	643 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	DDX5	P17844	614 aa	Known RBP	4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	ARF4	P18085	180 aa	Predicted RBP	4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	VCL	P18206	1134 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	RFX1	P22670	979 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	DNAJB2	P25686	324 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	EEF1G	P26641	437 aa	Known RBP	4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	TKT	P29401	623 aa	Known RBP	4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	HOXC12	P31275	282 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	EVI2B	P34910	448 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	SOX6	P35712	828 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	ADH7	P40394	386 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	CD86	P42081	329 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	AARS	P49588	968 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	MAN2A2	P49641	1150 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	NUBP1	P53384	320 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	APOBR	Q0VD83	1088 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	TBX2	Q13207	712 aa	Predicted RBP	4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	EPHA7	Q15375	998 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	UBE3C	Q15386	1083 aa		4.14	□□□□□ -1.75
LSM2-211	ENST00000475835	MOG	Q16653	247 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms